Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D19
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 33 0.34
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 31 1.0
02_01_0016 + 110796-110979,111252-111768,111847-112213 31 1.0
02_04_0191 - 20783143-20784365,20784453-20784597,20784977-207853... 30 1.8
01_06_0150 + 27025208-27025663 30 2.4
02_02_0074 + 6567362-6567550,6567685-6567753,6567869-6567970,656... 29 3.2
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 29 4.2
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 4.2
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 5.5
12_02_0372 + 18212948-18213821,18213887-18214030,18214128-182142... 28 7.3
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 28 7.3
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 7.3
04_03_0864 + 20401025-20401810 28 7.3
11_06_0610 - 25449085-25453284 28 9.6
08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868... 28 9.6
02_05_0664 + 30717551-30719491 28 9.6
02_05_0584 - 30135768-30135790,30136104-30136866 28 9.6
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 28 9.6
>06_03_1310 + 29238644-29240260
Length = 538
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 754 APYRSPYPR-CEATSVSPVXCPSTGPTPVHVPAPYP 650
AP+RSP P P P + PTP H+P P P
Sbjct: 379 APHRSPLPHHMPPRRTPPTPPPPSSPTPSHLPPPPP 414
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 751 PYRSPYPRCEATSVSPVXCPSTGPTPVHVPAPYPRREASA 632
P P P + +++ + P+ P P P+P PRR SA
Sbjct: 63 PPARPSPIAQLKTLASIRAPAPSPKPSPSPSPSPRRSTSA 102
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 754 APYRSPYPRCEATSVSPVXCPSTGPTPVHVPAP 656
+P SP P A + SP+ P P PV PAP
Sbjct: 154 SPLTSPSPPALALAPSPIPTPIIAPPPVSSPAP 186
>02_04_0191 -
20783143-20784365,20784453-20784597,20784977-20785345,
20786164-20786250,20786405-20786603,20786733-20786818
Length = 702
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 757 GAPYRSPYPRCEATSVSPVXCPSTGPTPVH-VPAPYP 650
G P+ +P V V PS P PVH VP P P
Sbjct: 297 GVPHHNPMVTTTNPEVKSVTAPSPLPVPVHVVPVPVP 333
>01_06_0150 + 27025208-27025663
Length = 151
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 679 TPVHVPAPYPRREASAFCCPS*EASGLPPSMFLSTGLTPCTLRSPWPFP 533
+P P +PRR + P + G+PPS + + +L PW P
Sbjct: 71 SPPRTPWQWPRRPQARASGPQADLGGMPPSFYGYCLVVAFSLPEPWWLP 119
>02_02_0074 +
6567362-6567550,6567685-6567753,6567869-6567970,
6568386-6568627,6569057-6569195,6569298-6569333,
6569838-6569972,6570315-6570547,6571204-6571298,
6571331-6571374,6571808-6571888
Length = 454
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -3
Query: 666 CLLLTPVEKPVPF--AVPVEKPVAY 598
C+ TP+EKP+ +P+E P+AY
Sbjct: 169 CISATPIEKPIDIVDGIPLEMPLAY 193
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -2
Query: 733 PRCEATSVSPVXCPSTGPTPVHVPAPYPRREASAFCCPS*EASGLP--PSMFLSTGLTPC 560
P +A S +P P P+P PAP P + A P A+ P P++ TP
Sbjct: 530 PGRQAASRAP--SPPAPPSPPQDPAPSPPHDPLAPSLPQAPAATPPQDPALTPPRAPTPT 587
Query: 559 TLRSPWPFP*RCQCP 515
++P P P + + P
Sbjct: 588 PPQAPLPAPSKSRAP 602
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 778 PYPRXS*GAPYRSPYPRCEATSVSPVXCPSTGPTPVHVPAPYP 650
P+ S AP+R P P SPV P+ P P H P+P P
Sbjct: 23 PFKPLSSAAPFRRPSP--PPPPPSPVPSPAP-PPPPHRPSPSP 62
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -2
Query: 754 APYRSPYPRCEATSVSPVXCPSTGPTPVHVPAPYPRREASAFCCPS*EASGLPPSMFLST 575
A Y SP P T T P P P P P A P PP
Sbjct: 32 ATYGSPIPPSPTTCYPVSSAAPTAPPPKPSPTPPPASPPPAPTPPQTRPPSPPPQQQQPR 91
Query: 574 GLTPCTLRSP--WPFP 533
++P + P WP P
Sbjct: 92 PVSPPPVAEPYYWPKP 107
>12_02_0372 +
18212948-18213821,18213887-18214030,18214128-18214273,
18214854-18214862
Length = 390
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 753 PRTAAXTPVVKQRRCPPSXARRQALPPCMCLLLTPVEKPVPFAVPVEKPV-AYPRP 589
P + PVV+ PS + PP L T +P+ + PV KP +PRP
Sbjct: 36 PTISRSVPVVQPSS--PSSPTSEPPPPQQQLTSTAPPRPIVISEPVRKPTQPHPRP 89
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 378 RDWLLDCYGHVPLNSYGVGPVNGHFDGNGDWPVDR 482
+D L+D Y +VP YG+ P N D P DR
Sbjct: 67 KDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDR 101
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = -3
Query: 708 PPSXARRQALPPCMCLLLTPVEKPVPFAVPVEKPVAYPRPCS 583
PPS A + LPP TP PVP A P P P P S
Sbjct: 95 PPSQAAQSPLPP-TTTTTTPPTAPVPAAAP---PPTAPSPYS 132
>04_03_0864 + 20401025-20401810
Length = 261
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 600 RPLASQLGQQKALASRRG*GAGTCTGVGPV 689
RP+A LG+ K LASRR G GPV
Sbjct: 229 RPVAVGLGEMKRLASRRWPETMAVAGQGPV 258
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -3
Query: 774 TPVEVKVPRTAAXT--PVVKQRRCPPSXARRQALPPCMCLLLTPVEKPVPFAVPVEKP 607
TP + P T + P V + PP+ + PP L P KP+P VPV P
Sbjct: 1090 TPEKSYPPSTPEESSPPSVPKASSPPT--EKSLPPPATVSLPPPTVKPLPPPVPVSSP 1145
>08_02_0581 +
18986084-18986176,18986284-18986668,18986779-18986861,
18986966-18987110,18987823-18987951,18988047-18988171,
18988261-18988419,18988503-18988665,18988750-18988875,
18989110-18989471,18989572-18989772,18989873-18989982,
18990079-18990163,18990298-18990426,18990505-18990610,
18990688-18990776,18990885-18991184
Length = 929
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 697 CPSTGPTPVHVPAPYPRREASAFCCPS*EASGLPPSMFLSTGLTPCTL 554
CP PTP PR E+ A S GLP TG P ++
Sbjct: 101 CPIKSPTPWPALVQVPRPESRAVRIASQPFDGLPDPTCRDTGSCPASV 148
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 666 CLLLTPVEKPVPFAVPVEKPVAYPRP 589
C LL P +P+P P P + PRP
Sbjct: 4 CRLLHPYPQPLPLPPPPPPPTSTPRP 29
>02_05_0584 - 30135768-30135790,30136104-30136866
Length = 261
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -2
Query: 751 PYRSPYPRCEATSVSPVXCPSTGPTPVHVPAPYPRREASAFCCPS*EASGLP 596
P P P A P S P P+ P P P + A P SGLP
Sbjct: 100 PLPLPAPGSPAAGAPPSSGSSGFPFPMPSPLPLPAHGSPAAGAPPSSGSGLP 151
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 564 GVRPVDRNMDGGRPLASQLGQQKALASRRG*GAGTCTGV 680
G+ P R+ D +P+ + GQ+ +RG G TC V
Sbjct: 203 GIGPEVRSGDLPQPIMLETGQEFTFTIKRGVGTETCVSV 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,116,661
Number of Sequences: 37544
Number of extensions: 340291
Number of successful extensions: 1383
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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