Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D19
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.0  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   3.5  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   3.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.6  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    24   4.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 684 ALPPCMCLLLTPVEKPVPFAVPVEKPV 604
           A PP   L+  P+  P+P  +PV  PV
Sbjct: 622 AAPPVTILVPYPIIIPLPLPIPVPIPV 648


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 577 STGTWTGVGHWLLNWDSKRHWLLDGGK 657
           +T  W G   WL  W+ +R    DGGK
Sbjct: 359 ATDFWNGRAQWLPTWNLER----DGGK 381


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 577 STGTWTGVGHWLLNWDSKRHWLLDGGK 657
           +T  W G   WL  W+ +R    DGGK
Sbjct: 359 ATDFWNGRAQWLPTWNLER----DGGK 381


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 663 LLLTPVEKPVPFAVPVEKPVAY 598
           L++  ++ P PF +P+ K + Y
Sbjct: 429 LMIPIIDIPAPFGIPIRKIIKY 450


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 651 PVEKPVPFAVPVEKPVAYPRP 589
           PV  PVP AVP    V  P+P
Sbjct: 177 PVPHPVPIAVPHYVKVYIPQP 197



 Score = 23.8 bits (49), Expect = 6.1
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 6/30 (20%)
 Frame = -1

Query: 479 VDRPVAVPV----KVPVDRPY--PVTVERH 408
           V++P  V V    +VPV +PY  PVTV +H
Sbjct: 236 VEKPFPVEVLKKFEVPVPKPYPVPVTVYKH 265



 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 648 VEKPVPFAVPVEKPVAYPRP 589
           +EKPVP+ V    P+   +P
Sbjct: 220 IEKPVPYTVEKPYPIEVEKP 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,636
Number of Sequences: 2352
Number of extensions: 11568
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)