Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D19
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 31 1.2
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adap... 30 1.6
AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adap... 30 1.6
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 1.6
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 2.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 3.7
U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protei... 29 5.0
U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protei... 29 5.0
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 29 5.0
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 6.6
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 6.6
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 28 8.7
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 28 8.7
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 28 8.7
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 28 8.7
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 778 PYPRXS*GAPYRSPYPRCEATSVSPV-XCPSTGPTPVHVPAPYPRREASA 632
P P + AP +P P +A + +PV P P P PAP P A A
Sbjct: 90 PVPEPAQLAPQSAPEPTPDAPAAAPVQETPQVAPAP-ETPAPAPETPAPA 138
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/77 (37%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = -2
Query: 751 PYRSPYPRCEAT--SVSPVXCPS--TGPTPVHVPAPYPRREASAFCCPS*EASGLPPSMF 584
P RSP CE T S SPV S + PT PAP R AS P L P
Sbjct: 333 PPRSPGLSCEETETSASPVNSSSSHSSPTSPVKPAPVKHRSASQ-KLPGKSTKTLNPKPA 391
Query: 583 LST-GLTPCTLRSPWPF 536
ST +TP + + P F
Sbjct: 392 GSTRSVTPVSTKPPRTF 408
>Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical
protein T03D8.1c protein.
Length = 549
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 694 PSTGPTPVHVPAPYPRREASAFCCPS 617
P +GP P H P P P R+A + PS
Sbjct: 470 PKSGPPPAHAPPPLPVRQAVSNGSPS 495
>Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical
protein T03D8.1b protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 694 PSTGPTPVHVPAPYPRREASAFCCPS 617
P +GP P H P P P R+A + PS
Sbjct: 322 PKSGPPPAHAPPPLPVRQAVSNGSPS 347
>Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical
protein T03D8.1a protein.
Length = 593
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 694 PSTGPTPVHVPAPYPRREASAFCCPS 617
P +GP P H P P P R+A + PS
Sbjct: 514 PKSGPPPAHAPPPLPVRQAVSNGSPS 539
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -3
Query: 753 PRTAAXTPVVKQRRCPPSXARRQALPPCMCLLLTPVEKPVPFAVPVEK-PVAYPRP 589
PRTAA T PP ++ PP P P P VPVEK P P P
Sbjct: 164 PRTAASTRTAISAPPPPRPPPQE--PPKPVEQAAPPPPPAPMPVPVEKAPEPVPAP 217
>AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adapter
1s protein.
Length = 549
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 694 PSTGPTPVHVPAPYPRREASAFCCPS 617
P +GP P H P P P R+A + PS
Sbjct: 470 PKSGPPPAHAPPPLPVRQAVSNGSPS 495
>AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adapter
1 protein.
Length = 593
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 694 PSTGPTPVHVPAPYPRREASAFCCPS 617
P +GP P H P P P R+A + PS
Sbjct: 514 PKSGPPPAHAPPPLPVRQAVSNGSPS 539
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -3
Query: 777 HTPVEVKVPRTAAXTPVVKQRRC--PPSXARRQALPPCMCLLL-TPVEKPVPFAVPVEKP 607
+ P P TPV + C PP A P + + PV+ PVP VPV P
Sbjct: 116 YEPYACAAPPCPPPTPVYEPYACAAPPCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVP 175
Query: 606 VAYP--RPCSC 580
V P +P C
Sbjct: 176 VPTPVYQPTYC 186
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 733 PRCEATSVSPVXC-PSTGPTPVHVPAP 656
P C A + +PV P+ P PV+ PAP
Sbjct: 189 PPCPAPAATPVYAQPAPRPMPVYAPAP 215
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Frame = -2
Query: 778 PYPRXS*GAPYRSPYPRCEATSV---SPVXCPSTGPTPVHVPAPYPRREASAFCCPS*EA 608
P P+ P+ P P+ + S SP+ P P P P P P+ + F P
Sbjct: 8 PTPKPK-SEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFP 66
Query: 607 SGLP---PSMFLSTGLTPCTLRSPWPFP 533
+P P F L P + P P P
Sbjct: 67 KPMPKHKPKPFPKPMLFPKPMPFPKPMP 94
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 651 PVEKPVPFAVPVEKPVAYPRP 589
P+ KP+PF P+ KP P+P
Sbjct: 240 PIPKPMPFPKPMPKPKPKPKP 260
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 751 PYRSPYPRCEATSV---SPVXCPSTGPTPVHVPAPYPR 647
P+ P P+ + S +P+ P P P H P P+P+
Sbjct: 88 PFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPK 125
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 4/110 (3%)
Frame = -2
Query: 742 SPYPRCEATSV-SPVX--CPSTGPTPVHVPAPYPRREASAFCCPS*EASGLP-PSMFLST 575
+P P E T +P P+T P PAP P + + P+ E + P P++ +
Sbjct: 574 APAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETPAPAPAAEETPAPAPAVEETP 633
Query: 574 GLTPCTLRSPWPFP*RCQCPNXXXXXXXXXXXXTGQSPFPSKCPLTGPTP 425
P +P P P + P ++P P+ P P
Sbjct: 634 APAPAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAP 683
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 754 APYRSPY-PRCEATSVSPVXCPSTGPTPVHVPAPYPRREASAFCCP 620
+P PY P P P GP+PV P P +A CCP
Sbjct: 77 SPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCP 122
>U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protein
11, isoform b protein.
Length = 106
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = -3
Query: 741 AXTPVVKQRRCPPSXARRQALPPCMCLLLTPVEKPV-----PFAVPVEKPVAYPRP 589
A TP+V + PP + + P + ++ P+ +P+ P P P+ Y +P
Sbjct: 35 APTPIVVAQPPPPMIVPQPQIVPVVQQIMQPMVQPIYPSVQPIVYPTATPIIYTQP 90
>U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protein
11, isoform a protein.
Length = 232
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = -3
Query: 741 AXTPVVKQRRCPPSXARRQALPPCMCLLLTPVEKPV-----PFAVPVEKPVAYPRP 589
A TP+V + PP + + P + ++ P+ +P+ P P P+ Y +P
Sbjct: 161 APTPIVVAQPPPPMIVPQPQIVPVVQQIMQPMVQPIYPSVQPIVYPTATPIIYTQP 216
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/63 (38%), Positives = 25/63 (39%)
Frame = +3
Query: 594 GGRPLASQLGQQKALASRRG*GAGTCTGVGPVDGHXTGDTDVASQRGXGLRYGAP*LXRG 773
GGR S G Q A RRG G G GP G D +RG G G RG
Sbjct: 498 GGRGQDSDSGSQDAFPGRRGSGGPGGRGQGPDFG---PQDDFPGRRGSGGPEGRD--GRG 552
Query: 774 YGP 782
GP
Sbjct: 553 QGP 555
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 697 CPSTGPTPVHVPAPYP 650
CP T PTP HVP P
Sbjct: 996 CPQTAPTPPHVPTGRP 1011
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -2
Query: 778 PYP-RXS*GAPYRSP---YPRCEATSVSPVXCPSTGPTPVHVPAPYPRRE 641
PYP R G RSP YPR V C GP P + P P++E
Sbjct: 223 PYPERNGGGCRQRSPQPQYPRTNEFRAPVVECHGNGPAPCN---PQPQQE 269
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -2
Query: 778 PYP-RXS*GAPYRSP---YPRCEATSVSPVXCPSTGPTPVHVPAPYPRRE 641
PYP R G RSP YPR V C GP P + P P++E
Sbjct: 223 PYPERNGGGCRQRSPQPQYPRTNEFRAPVVECHGNGPAPCN---PQPQQE 269
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -2
Query: 778 PYP-RXS*GAPYRSP---YPRCEATSVSPVXCPSTGPTPVHVPAPYPRRE 641
PYP R G RSP YPR V C GP P + P P++E
Sbjct: 223 PYPERNGGGCRQRSPQPQYPRTNEFRAPVVECHGNGPAPCN---PQPQQE 269
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 754 APYRSPYPRCEATSVSPVXCPSTGPTPVHVPAPYPRREASAFCC 623
AP P P + V P+ P P P+ VP P P + CC
Sbjct: 11 APVPVPAPVPQPVPV-PMPMPMPMPMPMPVPVPVPVQSNCCSCC 53
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -2
Query: 778 PYPRXS*GAPYR--SPYPRCEATSVSPVXC--PSTG-PTPVHVPAPYPRREASA 632
PYP+ + AP +PYP+ + +P P P P PAPYP+ A
Sbjct: 56 PYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPA 109
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 587 HGRG*ATGFSTGTAKGTGFSTG 652
+G TGF +G A GTGF +G
Sbjct: 70 NGNAGGTGFGSGNAGGTGFGSG 91
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 587 HGRG*ATGFSTGTAKGTGFSTG 652
+G TGF +G A GTGF +G
Sbjct: 70 NGNAGGTGFGSGNAGGTGFGSG 91
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 751 PYRSPYPRCEATSVSPVXCPSTGPTPVHVPAP 656
P +P P A S +P P++ PTP P P
Sbjct: 211 PPLTPLPSPGAQSTAPPVFPTSTPTPTSTPTP 242
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 587 HGRG*ATGFSTGTAKGTGFSTG 652
+G TGF +G A GTGF +G
Sbjct: 70 NGNAGGTGFGSGNAGGTGFGSG 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,097,447
Number of Sequences: 27780
Number of extensions: 257909
Number of successful extensions: 1028
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -