Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D18
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81047-14|CAH04642.1|  357|Caenorhabditis elegans Hypothetical p...    28   9.8  
AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical ...    28   9.8  

>Z81047-14|CAH04642.1|  357|Caenorhabditis elegans Hypothetical
           protein C41G6.16 protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 620 KSSKYHFVNEYLYRPVNQDEVDKKPNVSLKY 528
           K   Y  +  +L++ +N  +VDKK N+S KY
Sbjct: 235 KLISYIIIPFFLWKLLNGKKVDKKKNISTKY 265


>AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical
           protein Y75B12B.10 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 620 KSSKYHFVNEYLYRPVNQDEVDKKPNVSLKY 528
           K   Y  +  +L++ +N  +VDKK N+S KY
Sbjct: 210 KLISYIIIPFFLWKLLNGKKVDKKKNISTKY 240


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,737,318
Number of Sequences: 27780
Number of extensions: 204000
Number of successful extensions: 574
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)