Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D17
         (815 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical pr...    60   2e-09
AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.    60   2e-09
L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical pr...    38   0.009
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n...    29   5.3  
U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    28   9.2  
AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine re...    28   9.2  
AF016420-1|AAB65307.2|  310|Caenorhabditis elegans Serpentine re...    28   9.2  

>Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical
           protein H06O01.1 protein.
          Length = 488

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 43/81 (53%)
 Frame = -2

Query: 814 EKLKDEEVDIIKIDATANDXPNHXSTFPASPQFSGA*GQLQEPQRYNGGRALEDFIKYVS 635
           EKL  E+V I K+DATAND P           F         P  YNGGR ++DF+ ++S
Sbjct: 407 EKLNKEDVIIAKMDATANDVPPMFEVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFIS 466

Query: 634 EQATSELKGWDRKGNAKQGKE 572
           + +T  LKG+ R G  K+  E
Sbjct: 467 KHSTDGLKGFSRDGKKKKKTE 487


>AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.
          Length = 488

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 43/81 (53%)
 Frame = -2

Query: 814 EKLKDEEVDIIKIDATANDXPNHXSTFPASPQFSGA*GQLQEPQRYNGGRALEDFIKYVS 635
           EKL  E+V I K+DATAND P           F         P  YNGGR ++DF+ ++S
Sbjct: 407 EKLNKEDVIIAKMDATANDVPPMFEVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFIS 466

Query: 634 EQATSELKGWDRKGNAKQGKE 572
           + +T  LKG+ R G  K+  E
Sbjct: 467 KHSTDGLKGFSRDGKKKKKTE 487


>L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical
           protein C14B9.2 protein.
          Length = 618

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = -2

Query: 811 KLKDEEVDIIKIDATANDXPNHXSTFPASPQFSGA*GQLQEPQRYNGGRALEDFIKYVSE 632
           K     V + K+DAT ND P+  +       +    G+  EP +Y+G R LED  K++++
Sbjct: 547 KKTQPNVVLAKMDATINDAPSQFAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFMTK 606

Query: 631 QATSELKGWD 602
                 +  D
Sbjct: 607 HGVKSFQKKD 616


>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
            isoform a protein.
          Length = 1702

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -3

Query: 732  RLPHNFLEPKDSSKNLRDIMEDVL*RTSSS-------MFLNKPQANLRAGTERVTPNKER 574
            + P NFLE  DS   + +++ +V+    SS           K + +L  GT + TP K+ 
Sbjct: 935  QFPENFLEQPDSPDKVTEVINNVVASVLSSPDEFRGQKQFTKTEKHLLDGTSKPTPKKQS 994

Query: 573  KSCRRA 556
               RR+
Sbjct: 995  HVDRRS 1000


>U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical
           protein C46H11.2 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 468 EVIFHCFSHYIHPSHKYTRRSFMESFESQQHAYNSS 575
           +++F C  HY  P++ Y   +F  SF    H Y  S
Sbjct: 131 DIVFVCNGHYFAPNNPYEESAFEGSF-IHSHDYRHS 165


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 167 TQHMTTLAIFIKMFIISLPKGLKCYHTFVPRYTESN 274
           T  +T  AI   +FI+S+  GLKCY  F  +   SN
Sbjct: 418 TYAITGGAIIAILFILSVCAGLKCYKKFNNKKKASN 453


>AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 23 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 373 HYYCKRNDNVSVPKECFSYLLSLGQI*HT*TQKSYFIVFHITFILHTNTHADLSWKVLNH 552
           +Y+C  N  ++ P+ C +   S+         KS  ++F +TF       + L WKV   
Sbjct: 146 YYFC--NFELTFPRNCLTIGCSINACSSRFWTKSKLVIFVLTFSFAALLSSKLLWKVFKK 203

Query: 553 NS 558
           ++
Sbjct: 204 DN 205


>AF016420-1|AAB65307.2|  310|Caenorhabditis elegans Serpentine
           receptor, class sx protein11 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 466 QKSYFIVFHITFILHTNTHADLSWKVLN 549
           Q S  IVFH  FILH ++  D S   LN
Sbjct: 280 QTSSAIVFHTNFILHKSSTMDFSASRLN 307


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,080,199
Number of Sequences: 27780
Number of extensions: 391855
Number of successful extensions: 1201
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)