Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D16
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0196 + 16246729-16246859,16247133-16247304                       31   1.2  
06_01_0850 - 6472213-6473541,6474229-6474282,6474616-6474671,647...    30   2.0  
06_02_0323 + 14381803-14382091,14382116-14382348,14382364-143824...    29   3.5  
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69...    29   6.2  
05_01_0299 - 2322204-2322734,2324089-2326164                           28   8.2  
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591...    28   8.2  

>02_03_0196 + 16246729-16246859,16247133-16247304
          Length = 100

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 495 KYW*IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
           +Y  IG  + I  G G+  GI + +GI    G+D+   +   V  D+ V
Sbjct: 44  RYIGIGIGIGIGIGIGIGIGIGIGIGIGIGIGIDVDVDVDVDVDVDVDV 92


>06_01_0850 -
           6472213-6473541,6474229-6474282,6474616-6474671,
           6474824-6476012
          Length = 875

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = -1

Query: 521 NLSTNLPIFIPVYNKLNIVVFKLNKNTRLLKRARNTTNQQHRPPRVSFLLASSV*IEHLT 342
           +L+TNL  ++PV+  L+ ++  L KN+ LL    +   +    P ++FL    +    + 
Sbjct: 630 SLATNLAFWLPVFGSLDSILRALRKNSSLLSANLDKVVK----PNLAFLKQCGIDARDVA 685

Query: 341 ATPILSTKR 315
           + P L + R
Sbjct: 686 SNPNLYSSR 694


>06_02_0323 +
           14381803-14382091,14382116-14382348,14382364-14382460,
           14382900-14383024
          Length = 247

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 96  RSLNKLGKTIYFMHTCPSTHNNTANNNYEILSKWRVRGSRSTPRMTRR 239
           R+ +   K +Y  +     H  T +N  ++  K+R+ G++ T   TRR
Sbjct: 167 RATHSTTKVVYGFNPRAKMHETTKHNIEKMTEKYRIAGNKGTMEGTRR 214


>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
            693391-693518,693951-694010,694113-694163,694704-694821,
            694990-695915,695916-697707,697810-697943,698029-698526
          Length = 1774

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 581  SRNTNHNLNTSLNPSPGINLNLST 510
            +RNTNHN N SLN    + L+ S+
Sbjct: 1644 ARNTNHNTNLSLNHETAVPLSRSS 1667


>05_01_0299 - 2322204-2322734,2324089-2326164
          Length = 868

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -1

Query: 605 SHNIKPSXSRNTNHNLNTS-LNPSPGINLNLSTNLPIFIPVYNKLNIVVFKLNKNTRLLK 429
           S N  P+ S  +NH+ NT  ++ S  INL+   +  ++IP   K  +V+  + +   L  
Sbjct: 478 SSNDSPAPS--SNHDANTEGMDSSSKINLSYDEDQKVWIPQDKKDEMVLILVQRQKELQA 535

Query: 428 RARNTTN 408
             R+ T+
Sbjct: 536 HMRDWTD 542


>03_05_0696 -
           26856413-26856416,26857917-26858524,26859041-26859101,
           26859181-26859557,26860314-26861156
          Length = 630

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 569 NHNLNTSLNPSPGINLNLSTNLPIFIPVY 483
           NHN + S+ P+PG  L+LS N  I  P Y
Sbjct: 134 NHN-SMSVAPAPGQGLSLSLNTHILAPSY 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,498,795
Number of Sequences: 37544
Number of extensions: 277092
Number of successful extensions: 665
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)