Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D16
(848 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_8281| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_51116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_27731| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 29 6.3
SB_45729| Best HMM Match : rve (HMM E-Value=5.8e-21) 29 6.3
SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7) 29 6.3
SB_30798| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_42415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 28 8.3
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
I +++ID G GV G+ V VG+ G+ + +G V D+ V
Sbjct: 1420 IDIDIDIDIGVGVGVGVGVGVGVGVGVGVGVGVGVGVDVDVDVDV 1464
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
IG V + G GV G+ V VG+ G+D+ + V D+ +
Sbjct: 1428 IGVGVGVGVGVGVGVGVGVGVGVGVGVGVDVDVDVDVDVDVDVDI 1472
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
I +++ID GV G+ V VG+ G+ + +G V D+ V
Sbjct: 1418 IDIDIDIDIDIGVGVGVGVGVGVGVGVGVGVGVGVGVGVDVDVDV 1462
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
I +++I G GV G+ V VG+ G+ + + V D+ V
Sbjct: 1422 IDIDIDIGVGVGVGVGVGVGVGVGVGVGVGVGVGVDVDVDVDVDV 1466
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
+G V + G GV G+ V VG+ +D+ + V DI +
Sbjct: 1430 VGVGVGVGVGVGVGVGVGVGVGVGVGVDVDVDVDVDVDVDVDIDI 1474
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
I +++ID + G+ V VG+ G+ + +G V D+ V
Sbjct: 1416 IDIDIDIDIDIDIGVGVGVGVGVGVGVGVGVGVGVGVGVGVDVDV 1460
>SB_8281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
+G +V++D V+A ++V VG+ G+D+ + V D+ V
Sbjct: 8 VGVDVDVDADVDVEADVDVGVGVDVDVGVDVDVGVDVDVDVDVGV 52
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISVV 644
+ +V+++ V G++V VG+ G+D+ + V D+ VV
Sbjct: 14 VDADVDVEADVDVGVGVDVDVGVDVDVGVDVDVDVDVGVDVDVDVV 59
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -1
Query: 641 NRDISXNXST----KXSHNIKPSXSRNTNHNLNTSLNPSPGINLNLSTN 507
N++IS N +T K S N K S + NT+ N NTS N + N N S N
Sbjct: 107 NKNISDNNNTSDNNKTSDNNKTSDNNNTSDNNNTSDNNNTSDNNNTSDN 155
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 653 TQLHNRDISXNXSTKXSHNIKPSXSRNTNHNLNTSLNPSPGINLNLSTN 507
T +N + S N +T ++N S + N N+N N + N S N N +TN
Sbjct: 48 TTNNNSNSSNNNNTTTNNNNSNSSNNNNNNNKNNNNNNSNNNNNNSNTN 96
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -1
Query: 695 TTDSXIXSYTXXXXTQLHNRDISXNXSTKXSHNIKPSXSRNTNHNLNTSLNPSPGINLNL 516
TT++ S T +N S N + + N + S N N+N NT+ N S N N
Sbjct: 48 TTNNNSNSSNNNNTTTNNNNSNSSNNNNNNNKNNNNNNSNNNNNNSNTNNNNSNNSNNNN 107
Query: 515 STN 507
S++
Sbjct: 108 SSS 110
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 644 HNRDISXNXSTKXSHNIKPSXSRNTNHNLNTSLNPSPGINLNLSTN 507
+N + S N + +++ S S N N+N N + N + N N +TN
Sbjct: 5 NNNNSSNNNNNNNNNSSSNSSSNNNNNNNNNNNNNNNNNNNNTTTN 50
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/105 (21%), Positives = 45/105 (42%)
Frame = -1
Query: 650 QLHNRDISXNXSTKXSHNIKPSXSRNTNHNLNTSLNPSPGINLNLSTNLPIFIPVYNKLN 471
Q HN + + N + + N S + N+N N N++ N + N N ++N N +N
Sbjct: 107 QQHNNNSNSNNNINSNRNSNSSSNSNSNSNNNSNSNNNINSNSNSNSNSNSNSNSNNNIN 166
Query: 470 IVVFKLNKNTRLLKRARNTTNQQHRPPRVSFLLASSV*IEHLTAT 336
N N+ + + + +N + + A++ +TAT
Sbjct: 167 -----SNSNSNINSNSNSNSNSNSNSTVTATVTATATATATVTAT 206
>SB_51116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 507 IGTEVEIDTGAGVQAGIEVVVGIAAXAGLDIVAXLGTVVXADISV 641
+ V ID GV ++V V + G+D+ + V D+SV
Sbjct: 404 VDVSVNIDVDVGVDVPVDVSVDVPVDVGVDVSVDVSVDVGVDVSV 448
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 629 SXNXSTKXSHNIKPSXSRNTNHNLNTSLNPSPGINLNLSTN 507
S + S + S N+ + +RN+N N N + NPS + +LS N
Sbjct: 588 SSSPSVRPSPNLISNPNRNSNSNSNRNPNPSSNPSPSLSPN 628
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 599 NIKPSXSRNTNHNLNTSLNPSPGINLNLSTNLP 501
N +P+ S N +S+ P PG+N + S+ LP
Sbjct: 1259 NTEPTDSLNKTQANPSSIRPPPGLNTSTSSGLP 1291
>SB_27731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = -1
Query: 602 HNIKPSXSRNTNHNLNTSLNPSPGINLNLSTNLPIFIPVYNK--LNI-VVFKLNKNTRLL 432
H+I S + N N ++N ++N + I +N++ N+ I I + ++ NI + K K+ LL
Sbjct: 56 HDINISINTNNNIDINITININNNIAINITININIDIDIRHQRIANINIPDKSFKSCGLL 115
Query: 431 KRA 423
RA
Sbjct: 116 TRA 118
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 162 TANNNYEILSKWRVRGSRSTPRMTRRIAN*CMLF 263
T N +Y+ +W +R R+TP T R+A LF
Sbjct: 1522 TENKSYKQEMQWLLRNYRATPHSTTRVAPATALF 1555
>SB_45729| Best HMM Match : rve (HMM E-Value=5.8e-21)
Length = 611
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 162 TANNNYEILSKWRVRGSRSTPRMTRRIAN*CMLF 263
T N +Y+ +W +R R+TP T R+A LF
Sbjct: 439 TENKSYKQEMQWLLRNYRATPHSTTRVAPATALF 472
>SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7)
Length = 177
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 614 TKXSHNIKPSXSRNTNHNLNTSLNPSPGINLNLSTNLPIFIPVYNK 477
T + + PS S T + T+ + +LST+LP+ +P +K
Sbjct: 96 TIAASQLTPSSSATTTTTIRTNTKTTESTITSLSTSLPVILPTSSK 141
>SB_30798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 641 NRDISXNXSTKXSHNIKPSXSRNTNHNLNTSLNPSPGINLNLSTN 507
N +++ N + + N S +RN N N N + N S NL + N
Sbjct: 5 NANLNRNRNQNKNRNQNQSQNRNRNRNRNRNQNQSQNRNLFMCQN 49
>SB_42415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 525 IDTGAGVQAGIEVVVGIAAXAGLDIVAXLGT 617
+ TG GV G+ VV + AGL I A + T
Sbjct: 650 VGTGVGVLVGVPVVASLVLGAGLTITAGVVT 680
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 635 DISXNXSTKXSHNIKPSXSRNTNHNLNTSLNPSPGINL--NLSTNLP 501
+IS S K S P S T+ LNTSLN S +L +L+TN P
Sbjct: 371 EISPRTSPKTSSKTSPKTSLKTS--LNTSLNTSQKTSLKRSLNTNKP 415
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,037,810
Number of Sequences: 59808
Number of extensions: 331410
Number of successful extensions: 939
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -