Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D15
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...   155   3e-38
Z77662-12|CAB01202.2|  338|Caenorhabditis elegans Hypothetical p...    31   1.3  
AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical protein
            T23D8.4 protein.
          Length = 898

 Score =  155 bits (376), Expect = 3e-38
 Identities = 71/121 (58%), Positives = 97/121 (80%)
 Frame = -2

Query: 765  YIVNEKMNAKVWDLMVGADNVRAMXGRXIREESLRTYLFTYAHVYASLSLRSLADMFELP 586
            YIVN+KMN KVW+L   A+ V+ M  R I+EESLRTYL TY+ VYA++SL+ LAD+FEL 
Sbjct: 712  YIVNDKMNQKVWNLFHNAETVKGMVVRRIQEESLRTYLLTYSTVYATVSLKKLADLFELS 771

Query: 585  RQRVHSLVSKMIINEELLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIF 406
            ++ VHS++SKMII EEL A+LD+P++C I+HR EP+R+Q LAL L+DK+  L ++NE+I 
Sbjct: 772  KKDVHSIISKMIIQEELSATLDEPTDCLIMHRVEPSRLQMLALNLSDKLQTLAENNEQIL 831

Query: 405  E 403
            E
Sbjct: 832  E 832


>Z77662-12|CAB01202.2|  338|Caenorhabditis elegans Hypothetical
           protein F47B8.9a protein.
          Length = 338

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = +1

Query: 40  VTRFIFPKFKINEKMNTHL*N*LFLESKKKLSGVDNADEFYTINFITTMFTVCLVF 207
           V   IF  FKIN KMN++L      E+ KK+     A++  T+ FI T+  + L F
Sbjct: 218 VVAMIFFYFKINSKMNSNL---NMSENLKKMQ--KQANQILTMQFILTLIFIQLPF 268


>AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK6.2 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +2

Query: 398 CFSNIRSFESTKFPTLSASCSARACIRVGSERCKIAHSLGSSNDAK 535
           CF     FE   F    A+C  + C+ VG       H LG  N  K
Sbjct: 45  CFLGENCFERPPFTRKCAACRFQKCLHVGMSLPSFLH-LGEQNKEK 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,866,336
Number of Sequences: 27780
Number of extensions: 248932
Number of successful extensions: 677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)