Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D14
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 85 4e-17
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 85 4e-17
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 81 9e-16
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 81 9e-16
Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassi... 30 2.2
AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative pota... 30 2.2
Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical ... 29 3.9
AF016414-6|AAG24022.1| 323|Caenorhabditis elegans Serpentine re... 28 6.8
U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 85.4 bits (202), Expect = 4e-17
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = -2
Query: 630 LTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSN 451
LTFSYGRALQASVL+AWGGK ENI A Q+ L+ R+KANG A++GKY AG + AA++S
Sbjct: 301 LTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKY-AGEDAAGAAAESL 359
Query: 450 FVKSHAY 430
FV H+Y
Sbjct: 360 FVAKHSY 366
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 85.4 bits (202), Expect = 4e-17
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = -2
Query: 630 LTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSN 451
LTFSYGRALQASVL+AWGGK ENI A Q+ L+ R+KANG A++GKY AG + AA++S
Sbjct: 301 LTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKY-AGEDAAGAAAESL 359
Query: 450 FVKSHAY 430
FV H+Y
Sbjct: 360 FVAKHSY 366
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = -2
Query: 630 LTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSN 451
LTFSYGRALQAS L W GK ENI A Q+ L+ RA+ N LA+VGKY + AAS+S
Sbjct: 299 LTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSL 358
Query: 450 FVKSHAY 430
FV +H+Y
Sbjct: 359 FVANHSY 365
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -1
Query: 700 GQSEEEASVHLNAINAGTSRGP 635
GQSEE+A+++LNAIN + + P
Sbjct: 275 GQSEEDATLNLNAINQVSGKKP 296
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = -2
Query: 630 LTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSN 451
LTFSYGRALQAS L W GK ENI A Q+ L+ RA+ N LA+VGKY + AAS+S
Sbjct: 300 LTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSL 359
Query: 450 FVKSHAY 430
FV +H+Y
Sbjct: 360 FVANHSY 366
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -1
Query: 700 GQSEEEASVHLNAINAGTSRGP 635
GQSEE+A+++LNAIN + + P
Sbjct: 276 GQSEEDATLNLNAINQVSGKKP 297
>Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical
protein F08B12.3c protein.
Length = 1086
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 257 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 99
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 99 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 151
>Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical
protein F08B12.3b protein.
Length = 1107
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 257 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 99
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical
protein F08B12.3a protein.
Length = 1119
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 257 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 99
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassium
channel protein.
Length = 1107
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 257 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 99
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative
potassium channel Slo-2 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 257 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 99
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical
protein W05B5.2 protein.
Length = 362
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 484 LYSF-AGRF*IELCQISRLLNEDELTDSNIRLYLKNQTKKK 365
LYSF +GRF E C I L + +++ + LKNQT +K
Sbjct: 320 LYSFLSGRF--EFCSIYILEKNQSIKPTDLYIILKNQTNEK 358
>AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical
protein Y113G7A.3 protein.
Length = 821
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 675 CI*TLSTLGPQEALVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVG 499
C+ T +L P +ALV +YGR +Q L G + G +E+ + + +A G
Sbjct: 154 CLQTALSLLPADALVGLITYGRMVQLHELNTQGISRSYVFKGTKEVTAKQIKDVMAGGG 212
>AF016414-6|AAG24022.1| 323|Caenorhabditis elegans Serpentine
receptor, class h protein211 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 323 VKIYF*RIFIDLTPSMIDVMKLFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYD--ALV 150
V I+ + + TPS + +K F FH F I+ +S + YF + + Y A +
Sbjct: 30 VHIFVGYVILFKTPSRMGNVKWFMFHVHFWSAILDVSFTFLVTPYFIFPATAGYSLGAFI 89
Query: 149 WL 144
W+
Sbjct: 90 WI 91
>U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical
protein B0034.4 protein.
Length = 216
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = +1
Query: 574 PSPGAEHRSLEGAPVAERQNQGLLRSQR**RSDAPRPPLRTDHGRGNVTPGTAAGPVXKX 753
PSP + ++ AP +++ + + +++ RS A PPL ++H + + P+ K
Sbjct: 67 PSPKISNSTVPTAPTPKKEKKVVATTKKTERSVAQGPPLVSEHIKDEKKMPSVHKPIRKG 126
Query: 754 AV 759
++
Sbjct: 127 SI 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,561,483
Number of Sequences: 27780
Number of extensions: 326915
Number of successful extensions: 827
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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