Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D13
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.8  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   4.8  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 417 NASENVLIVCARWKEGHTGYMAVYN 343
           NA+E+ L +  R+ EGH   + VY+
Sbjct: 36  NATEHKLPISMRFNEGHQLSIIVYS 60


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 417 NASENVLIVCARWKEGHTGYMAVYN 343
           NA+E+ L +  R+ EGH   + VY+
Sbjct: 36  NATEHKLPISMRFNEGHQLSIIVYS 60


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 540 LLNIKQLS-ADENDTSLLDLVNLRSDASL 457
           L N++Q + AD+ND ++ DLV L  + +L
Sbjct: 632 LKNLRQKAEADKNDKAVKDLVILLFETAL 660


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -1

Query: 348 YNPSRQDLHANLTAVPSVPGTITIQNVSPAVKLVTNYTKNYQPAEDVLV 202
           YNPS++    ++T       T+T  ++         Y +  QP + +LV
Sbjct: 157 YNPSQKRQFLHITLASGRTLTVTPSHLLVLDDRTMKYAQKLQPGDFLLV 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,905
Number of Sequences: 336
Number of extensions: 3272
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)