Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D13
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-677|AAF54170.1|  565|Drosophila melanogaster CG2791-PA ...    52   7e-07
AY071357-1|AAL48979.1|  565|Drosophila melanogaster RE39378p pro...    52   9e-07
AY129450-1|AAM76192.1|  979|Drosophila melanogaster LD36241p pro...    29   7.1  
AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA...    29   7.1  

>AE014297-677|AAF54170.1|  565|Drosophila melanogaster CG2791-PA
           protein.
          Length = 565

 Score = 52.4 bits (120), Expect = 7e-07
 Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
 Frame = -1

Query: 588 DDRELASFAMLLPAAPLLNIKQLSADE-NDTSLLDLVNLRSDASLSHGEHHVAAAPARNA 412
           D   LA F  LLP  P++ +  ++     + +   + +LR  AS  HG  ++  A     
Sbjct: 422 DPSALAMFLSLLPGVPVVAVDAVAYQNVTEETYRQITSLRKTASYMHGNLNLYQA----- 476

Query: 411 SENVLIVCARWKEGHTGYMAVYNPSRQDLHANLTAVPSVPGTITIQNVSPAVKLVTNYTK 232
             + L+  +R K G+ GY  ++NP+     +N T   ++P  +T+   S       + + 
Sbjct: 477 --DPLVAFSRIKSGNPGYFVIFNPTELPQASNFTIPDNLPDKMTVSYFSEQYNNNMDNSG 534

Query: 231 NYQPA-----EDVLVPAKSTVVVSYVPIKHE 154
               A     +D+ V   S+++++YVP+K E
Sbjct: 535 KVAHAGRVNLKDLKVAPHSSIILTYVPVKAE 565


>AY071357-1|AAL48979.1|  565|Drosophila melanogaster RE39378p
           protein.
          Length = 565

 Score = 52.0 bits (119), Expect = 9e-07
 Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
 Frame = -1

Query: 588 DDRELASFAMLLPAAPLLNIKQLSADE-NDTSLLDLVNLRSDASLSHGEHHVAAAPARNA 412
           D   LA F  LLP  P++ +  ++     + +   + +LR  AS  HG  ++  A     
Sbjct: 422 DPSALAMFLSLLPGVPVVAVDAVAYQNVTEETYRQITSLRKTASYMHGNLNLYQA----- 476

Query: 411 SENVLIVCARWKEGHTGYMAVYNPSRQDLHANLTAVPSVPGTITIQNVSPAVKLVTNYTK 232
             + L+  +R K G+ GY  ++NP+     +N T   ++P  +T+   S       + + 
Sbjct: 477 --DPLVAFSRIKSGNPGYFVIFNPTELPQASNFTIPDNLPDKMTVSYFSGQYNNNMDNSG 534

Query: 231 NYQPA-----EDVLVPAKSTVVVSYVPIKHE 154
               A     +D+ V   S+++++YVP+K E
Sbjct: 535 KVAHAGRVNLKDLKVAPHSSIILTYVPVKAE 565


>AY129450-1|AAM76192.1|  979|Drosophila melanogaster LD36241p
           protein.
          Length = 979

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
 Frame = -2

Query: 410 ARTYSSFVQDGKRVTPVTWRCTTRP---GRISTRISLLYPPCPGR*QFKTSRQPSNLSPT 240
           +R+ S+    G  V P T    TRP   GRI    + + P    R Q   S Q SNL P 
Sbjct: 422 SRSTSTAPAGGATVVPPTSAAVTRPVTTGRIQRGSNTIRPMWSSRRQRPASEQLSNLGPA 481

Query: 239 IRRTISRQRT 210
                  Q T
Sbjct: 482 AWAQAQTQTT 491


>AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA,
           isoform A protein.
          Length = 1332

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
 Frame = -2

Query: 410 ARTYSSFVQDGKRVTPVTWRCTTRP---GRISTRISLLYPPCPGR*QFKTSRQPSNLSPT 240
           +R+ S+    G  V P T    TRP   GRI    + + P    R Q   S Q SNL P 
Sbjct: 774 SRSTSTAPAGGATVVPPTSAAVTRPVTTGRIQRGSNTIRPMWSSRRQRPASEQLSNLGPA 833

Query: 239 IRRTISRQRT 210
                  Q T
Sbjct: 834 AWAQAQTQTT 843


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,049,251
Number of Sequences: 53049
Number of extensions: 617372
Number of successful extensions: 1952
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1948
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)