Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D12
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 216  ADQNSIPTNADSTQTPV-PFCFCCTECI 136
            A+ N+IPTNA +T   +  F + C + +
Sbjct: 1020 ANTNNIPTNAGTTPGAILAFSWACNDAV 1047


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 213 DQNSIPTNADSTQTPVPFCFCCTE 142
           D N  P + D TQ  +P CFC  +
Sbjct: 155 DPNRAP-DCDPTQCVLPDCFCSAD 177


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 192 NADSTQTPVPFCFCCTE 142
           + D TQ  +P CFC  +
Sbjct: 154 DCDPTQCVLPDCFCSAD 170


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 517 NALQSPAPALRQTLRPRRRWPPGT 588
           N+   P P +  T RP    PP T
Sbjct: 395 NSYSVPEPTISTTPRPEWARPPST 418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,680
Number of Sequences: 336
Number of extensions: 3225
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)