Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D12
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 56 3e-08
03_01_0034 + 318432-318825,318902-319851 56 3e-08
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 56 3e-08
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 56 3e-08
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 55 6e-08
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 55 6e-08
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 55 6e-08
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 55 8e-08
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 34 0.17
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 34 0.17
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 33 0.22
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 33 0.22
02_05_1127 + 34292894-34293284,34293948-34295443 29 3.6
03_02_0943 + 12598616-12598789,12599790-12601250 29 6.2
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 580 GEGMDEMEFTEAESNMNDLVSEYQQY 605
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 551 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 579
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 421 GEGMDEMEFTEAESNMNDLVSEYQQY 446
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 392 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 420
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQY 425
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQY 425
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQY 425
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S +IQE+F+R S QFTAMFRRKAFLHWYT
Sbjct: 387 STSIQEMFRRVSEQFTAMFRRKAFLHWYT 415
Score = 53.2 bits (122), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 655 GMDEMEFTEAESNMNDLVSEYQQY 584
GMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 418 GMDEMEFTEAESNMNDLVAEYQQY 441
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 33.9 bits (74), Expect = 0.17
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
A+ E+F R +F M+ ++AF+HWY
Sbjct: 383 AVAEVFSRIDHKFDLMYAKRAFVHWY 408
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 33.9 bits (74), Expect = 0.17
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
A+ E+F R +F M+ ++AF+HWY
Sbjct: 464 AVAEVFSRIDRKFDLMYAKRAFVHWY 489
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 33.5 bits (73), Expect = 0.22
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWY 666
S ++ E+F R +F M+ ++AF+HWY
Sbjct: 381 STSVVEVFSRIDIKFDLMYSKRAFVHWY 408
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 33.5 bits (73), Expect = 0.22
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWY 666
S ++ E+F R +F M+ ++AF+HWY
Sbjct: 381 STSVVEVFSRIDHKFDLMYSKRAFVHWY 408
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 547 RQTLRPRRRWPPGTVGTRRQG 609
R T +P+RRWPPG+ G +G
Sbjct: 83 RATGQPKRRWPPGSSGGGARG 103
>03_02_0943 + 12598616-12598789,12599790-12601250
Length = 544
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 336 ICSIHSLIFHQASLRARSEICKG*SKIDTFYLHMCSRNKMADQNS 202
+ I +L+ ++S S +C G + Y +CS+ + AD+NS
Sbjct: 309 LAEIKALLSSESSSECGSSVCDGVTLSAEEYFTLCSKAQEADENS 353
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,485,136
Number of Sequences: 37544
Number of extensions: 313487
Number of successful extensions: 700
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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