Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D12
(854 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 58 2e-08
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 58 2e-08
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 58 2e-08
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 58 2e-08
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 58 2e-08
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 58 2e-08
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 58 2e-08
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 58 2e-08
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 58 2e-08
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 57 3e-08
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 57 3e-08
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 56 5e-08
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 56 5e-08
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 56 5e-08
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 56 5e-08
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 36 0.071
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 36 0.071
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 33 0.50
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 33 0.50
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 31 2.0
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 31 2.0
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 31 2.0
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 31 2.0
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 31 2.0
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 31 2.0
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 31 2.0
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 31 2.0
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 31 2.0
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 31 2.0
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 31 2.0
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 31 2.0
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 371 STAIQELFKRVSEQFTAMFRRKAFLHWYT 399
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYT 399
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYT 399
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 371 STAIQELFKRVSEQFTAMFRRKAFLHWYT 399
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 371 STAIQELFKRVSEQFTAMFRRKAFLHWYT 399
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 299 STAIQELFKRISEQFTAMFRRKAFLHWYT 327
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 328 GEGMDEMEFTEAESNMNDLVSEYQQY 353
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 299 STAIQELFKRISEQFTAMFRRKAFLHWYT 327
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 328 GEGMDEMEFTEAESNMNDLVSEYQQY 353
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 380 STAIQELFKRISEQFTAMFRRKAFLHWYT 408
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 409 GEGMDEMEFTEAESNMNDLVSEYQQY 434
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQELFKR S QFTAMFRRKAFLHWYT
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYT 399
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQY 425
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 57.2 bits (132), Expect = 3e-08
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQE+FKR S QFTAMFRRKAFLHWYT
Sbjct: 371 STAIQEIFKRISEQFTAMFRRKAFLHWYT 399
Score = 56.0 bits (129), Expect = 6e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 400 GEGMDEMEFTEAESNMNDLISEYQQY 425
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 57.2 bits (132), Expect = 3e-08
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -1
Query: 749 SXAIQELFKRXSXQFTAMFRRKAFLHWYT 663
S AIQE+FKR S QFTAMFRRKAFLHWYT
Sbjct: 436 STAIQEIFKRISEQFTAMFRRKAFLHWYT 464
Score = 56.0 bits (129), Expect = 6e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 465 GEGMDEMEFTEAESNMNDLISEYQQY 490
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 387 GEGMDEMEFTEAESNMNDLVSEYQQY 412
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWYT 663
AIQELFKR S QF+AMFRRKAFLHWYT
Sbjct: 360 AIQELFKRISEQFSAMFRRKAFLHWYT 386
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 406 GEGMDEMEFTEAESNMNDLVSEYQQY 431
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWYT 663
AIQELFKR S QF+AMFRRKAFLHWYT
Sbjct: 379 AIQELFKRISEQFSAMFRRKAFLHWYT 405
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 406 GEGMDEMEFTEAESNMNDLVSEYQQY 431
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWYT 663
AIQELFKR S QF+AMFRRKAFLHWYT
Sbjct: 379 AIQELFKRISEQFSAMFRRKAFLHWYT 405
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 56.4 bits (130), Expect = 5e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -2
Query: 661 GXGMDEMEFTEAESNMNDLVSEYQQY 584
G GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 406 GEGMDEMEFTEAESNMNDLVSEYQQY 431
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWYT 663
AIQELFKR S QF+AMFRRKAFLHWYT
Sbjct: 379 AIQELFKRISEQFSAMFRRKAFLHWYT 405
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWYT 663
AIQ LF+R +M RRKA LHWYT
Sbjct: 372 AIQTLFQRLLDASMSMLRRKAHLHWYT 398
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWYT 663
AIQ LF+R +M RRKA LHWYT
Sbjct: 372 AIQTLFQRLLDASMSMLRRKAHLHWYT 398
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI F S +F MF+++AF+HWY
Sbjct: 394 AISVAFSNLSYKFDLMFKKRAFVHWY 419
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI F S +F MF+++AF+HWY
Sbjct: 394 AISVAFSNLSYKFDLMFKKRAFVHWY 419
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 743 AIQELFKRXSXQFTAMFRRKAFLHWY 666
AI E + R +F M+ ++AF+HWY
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWY 408
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,510,404
Number of Sequences: 53049
Number of extensions: 557670
Number of successful extensions: 1219
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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