Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D08
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 171 4e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 171 4e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 171 4e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 171 4e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 171 4e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 171 4e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 171 4e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 165 2e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 165 4e-41
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 8e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 75 8e-14
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 8e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 37 0.020
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.73
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.73
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.73
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 9.0
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 9.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 9.0
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 193 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 248
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 249 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 308
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 309 FQQMWISKQEYDESGPSIVHRKCF 332
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 182 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM-ESAGIHETSYNSIM 240
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 241 KCDIDIRKDLYANTVLSGGTTMYP 264
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 223 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 278
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 279 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 338
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 FQQMWISKQEYDESGPSIVHRKCF 362
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 212 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM-ESAGIHETSYNSIM 270
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 271 KCDIDIRKDLYANTVLSGGTTMYP 294
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 94/144 (65%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 165 bits (402), Expect = 2e-41
Identities = 93/144 (64%), Positives = 96/144 (66%), Gaps = 3/144 (2%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSV---R 580
LE E PDGQVIT+GNER CP A FQP G S H T S + +
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI----HETSYNSIMKCDIDIRK 292
Query: 579 TXXXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 400
PGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 399 FQQMWISKQEYDESGPSIVHRKCF 328
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = -1
Query: 784 QEVATXASXXSLGXXYXIXXXXXXXXXXXXXPLPXGXLPTXVXXVWKXXGIHETTYNSIM 605
QE+AT AS SL Y + P + + GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM-ESAGIHETSYNSIM 284
Query: 604 KCDVDIRKDLYPNTVLSGGTTHVP 533
KCD+DIRKDLY NTVLSGGTT P
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYP 308
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 165 bits (400), Expect = 4e-41
Identities = 90/142 (63%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Frame = -2
Query: 750 LEXXTEFPDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSVRTXX 571
LE E PDGQVITIGNER CP FQP G A S +R
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEG--AGIHETTYQSIMKCDVDIRKDL 293
Query: 570 XXXXXXXXXXXXP-GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 394
GIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 294 YANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 353
Query: 393 QMWISKQEYDESGPSIVHRKCF 328
QMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QMWISKQEYDESGPSIVHRKCF 375
Score = 67.7 bits (158), Expect = 9e-12
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -1
Query: 637 GIHETTYNSIMKCDVDIRKDLYPNTVLSGGTTHVP 533
GIHETTY SIMKCDVDIRKDLY NTVLSGGT+ P
Sbjct: 273 GIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFP 307
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -2
Query: 531 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDE 361
G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425
Query: 360 SGPSIVHRKC 331
SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 74.5 bits (175), Expect = 8e-14
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = -2
Query: 531 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 352
G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 307 GFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGA 366
Query: 351 SIVHRKCF 328
S +H++ F
Sbjct: 367 SAMHKRFF 374
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = -1
Query: 670 PTXVXXVWKXXGIHETTYNSIMKCDVDIRKDLYPNTVLSGGTT 542
P + W G+ SIMKCDVD+R+ LY N VLSGGTT
Sbjct: 263 PDLIGTEWP--GMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTT 303
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 55.6 bits (128), Expect = 4e-08
Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Frame = -2
Query: 729 PDGQVITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSVRTXXXXXXXXX 550
PDG+VI +G ER P FQP S S T +
Sbjct: 247 PDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRL-DFYKHIVLSG 305
Query: 549 XXXXXPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL- 406
PG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 405 -STFQQMWISKQEYDESG 355
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 637 GIHETTYNSIMKCDVDIRKDLYPNTVLSGGTTHVP 533
G+ E + I D+D R D Y + VLSGGTT P
Sbjct: 277 GLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYP 311
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 495 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 346
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 634 IHETTYNSIMKCDVDIRKDLYPNTVLSGGTT 542
I +T I +C +D+R+ LY N VLSGG+T
Sbjct: 303 ISDTIDTLIQQCPIDVRRGLYENIVLSGGST 333
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = -2
Query: 750 LEXXTEFPDGQV-ITIGNERXXCPXAXFQPXXXGYGSXXASTRPHITPS*SATWTSVRTX 574
L+ T P Q I N R C F+P G + H S RT
Sbjct: 413 LDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAIL-QCPIDSRRTL 471
Query: 573 XXXXXXXXXXXXXPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 394
PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF+
Sbjct: 472 YRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFE 531
Query: 393 QMWISKQE 370
IS Q+
Sbjct: 532 DSCISLQQ 539
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.020
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -1
Query: 610 IMKCDVDIRKDLYPNTVLSGGTTHVP 533
+ KC +D+RK L+PN +L+GG + +P
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIP 223
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 433 PYGVLPLWRSNDLNLHCRWGESCD 504
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 433 PYGVLPLWRSNDLNLHCRWGESCD 504
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 433 PYGVLPLWRSNDLNLHCRWGESCD 504
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 269 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 361
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 372 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 271
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 269 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 361
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 453 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 292
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,073,201
Number of Sequences: 27780
Number of extensions: 298271
Number of successful extensions: 839
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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