Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D05
(839 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit... 188 2e-46
UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1; ... 167 4e-40
UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, wh... 151 2e-35
UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit co... 141 2e-32
UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4; Euk... 134 3e-30
UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamo... 109 1e-22
UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit, p... 98 2e-19
UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lambl... 90 7e-17
UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=... 82 2e-14
UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytic... 80 8e-14
UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=... 79 1e-13
UniRef50_A3GFV9 Cluster: Protein involved in co-translational pa... 79 2e-13
UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=... 79 2e-13
UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136, w... 77 4e-13
UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n... 77 6e-13
UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=... 76 1e-12
UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=... 74 5e-12
UniRef50_A3C0K6 Cluster: Putative uncharacterized protein; n=1; ... 73 7e-12
UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2; ... 73 1e-11
UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7; Sac... 72 2e-11
UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=... 71 5e-11
UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=... 70 6e-11
UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa... 69 2e-10
UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=... 67 6e-10
UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n... 66 1e-09
UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1; ... 65 2e-09
UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n... 63 7e-09
UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n... 61 3e-08
UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=... 57 6e-07
UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=... 56 1e-06
UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=... 54 3e-06
UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=... 54 6e-06
UniRef50_A7QN16 Cluster: Chromosome undetermined scaffold_129, w... 50 6e-05
UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2; ... 50 6e-05
UniRef50_UPI00015BB126 Cluster: protein translocase subunit secY... 49 1e-04
UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:... 49 2e-04
UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit co... 48 2e-04
UniRef50_Q7QS31 Cluster: GLP_661_12509_12237; n=1; Giardia lambl... 46 9e-04
UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3; ... 46 0.002
UniRef50_Q3JX83 Cluster: Putative uncharacterized protein; n=3; ... 39 0.18
UniRef50_A5C0J8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.55
UniRef50_Q2HBA1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.55
UniRef50_Q398T9 Cluster: Two component transcriptional regulator... 37 0.72
UniRef50_Q9C2B1 Cluster: Putative uncharacterized protein B11N2.... 35 2.9
UniRef50_A6QYP0 Cluster: Predicted protein; n=1; Ajellomyces cap... 35 2.9
UniRef50_A4MGD6 Cluster: YaeQ protein family; n=2; Burkholderia ... 33 6.8
UniRef50_Q4Q8V2 Cluster: Putative uncharacterized protein; n=3; ... 33 6.8
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 33 8.9
UniRef50_A5NNR1 Cluster: LigA; n=2; cellular organisms|Rep: LigA... 33 8.9
UniRef50_A0TSH0 Cluster: LigA; n=1; Burkholderia cenocepacia MC0... 33 8.9
UniRef50_A0K0B2 Cluster: Major facilitator superfamily MFS_1; n=... 33 8.9
UniRef50_Q0J844 Cluster: Os08g0137800 protein; n=12; Oryza sativ... 33 8.9
UniRef50_O48671 Cluster: Protein RER1B; n=11; Magnoliophyta|Rep:... 33 8.9
UniRef50_P29070 Cluster: Chitin synthase 1; n=8; Pezizomycotina|... 33 8.9
>UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit
alpha isoform 2; n=176; Eukaryota|Rep: Protein transport
protein Sec61 subunit alpha isoform 2 - Homo sapiens
(Human)
Length = 476
Score = 188 bits (458), Expect = 2e-46
Identities = 87/96 (90%), Positives = 93/96 (96%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
PVH ++Y++FM GSCAFFSKTWI+VSGSSAKDVAKQLKEQQMVMRGHRD SM+HELNRYI
Sbjct: 358 PVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYI 417
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI
Sbjct: 418 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 453
>UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 377
Score = 167 bits (405), Expect = 4e-40
Identities = 78/96 (81%), Positives = 88/96 (91%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P HAL YV+FM +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++ ELNRYI
Sbjct: 261 PFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYI 320
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
PTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTI
Sbjct: 321 PTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTI 356
>UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=11; Eukaryota|Rep: Chromosome
undetermined scaffold_28, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 474
Score = 151 bits (366), Expect = 2e-35
Identities = 70/96 (72%), Positives = 82/96 (85%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P+H +LY F+ G+CA FSKTWIDVSGSS KDVAKQLKEQ M + G+RD+SM L RYI
Sbjct: 359 PIHTILYTAFILGTCAVFSKTWIDVSGSSPKDVAKQLKEQDMQIVGYRDSSMKDVLKRYI 418
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
P AA+FGG+CIGAL++LADFLGAIGSGTGILL+VTI
Sbjct: 419 PIAASFGGMCIGALTILADFLGAIGSGTGILLSVTI 454
>UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Preprotein translocase, SecY subunit
containing protein - Tetrahymena thermophila SB210
Length = 551
Score = 141 bits (342), Expect = 2e-32
Identities = 67/96 (69%), Positives = 77/96 (80%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P+H +LYV+F+ +CA FSKTWI VSGSS KDVAKQLKEQ M + G RD+ + L RYI
Sbjct: 437 PLHTILYVVFILTTCALFSKTWIQVSGSSVKDVAKQLKEQGMGLVGSRDSGLKSHLKRYI 496
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
P AA FGGLCIGALSV+ADF+G IGSGTGILLAV I
Sbjct: 497 PIAATFGGLCIGALSVVADFIGVIGSGTGILLAVNI 532
>UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4;
Eukaryota|Rep: Protein transporter, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 478
Score = 134 bits (323), Expect = 3e-30
Identities = 60/96 (62%), Positives = 75/96 (78%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P H ++Y+ F+ +CA FSKTWI+VSGS +DVAKQLK+Q M + GHRD S+ EL R I
Sbjct: 358 PFHTVIYIAFIVTACALFSKTWIEVSGSGPRDVAKQLKDQNMTLAGHRDASIYKELKRII 417
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
PTAAAFGG +G LSV+AD +GA+GSGTGIL+A TI
Sbjct: 418 PTAAAFGGATLGLLSVVADMMGALGSGTGILMATTI 453
>UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamoeba
histolytica HM-1:IMSS|Rep: Sec61 alpha subunit -
Entamoeba histolytica HM-1:IMSS
Length = 447
Score = 109 bits (261), Expect = 1e-22
Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDN-SMIHELNRY 508
P+H ++ + C FS+ WI VSGSS+ DV KQL +Q++ +RG RD S ++ L++Y
Sbjct: 329 PIHGVISIGLTVFMCTIFSREWIKVSGSSSADVKKQLADQRVSIRGFRDGESSVYLLDKY 388
Query: 507 IPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVT 400
IP AA+FGG+CI LSV AD LGA+GSGTGILLA T
Sbjct: 389 IPIAASFGGMCISLLSVGADLLGAVGSGTGILLAAT 424
>UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit,
putative; n=5; Trichomonas vaginalis G3|Rep: Preprotein
translocase, SecY subunit, putative - Trichomonas
vaginalis G3
Length = 484
Score = 98.3 bits (234), Expect = 2e-19
Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = -3
Query: 726 TCPRRSPXHTXHXTPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRG 547
T P+ S T H P+H ++Y++F S F S ++ S + DVA+ LK+Q + ++G
Sbjct: 347 TAPQ-SIQQTIHD-PLHTIIYLIFSLSSAGFISYYYLRFSNQAPADVAEALKKQHLTLKG 404
Query: 546 HRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
HR++ E L+RYIPTAAA GG+ + LS +ADFL A GSGTGI+LAV+I
Sbjct: 405 HREDQKRLEKTLSRYIPTAAALGGILVALLSFVADFLSAFGSGTGIILAVSI 456
>UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_10951_12423 - Giardia lamblia
ATCC 50803
Length = 490
Score = 89.8 bits (213), Expect = 7e-17
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIH-ELNRY 508
P+H +L+ + + S+ W++ SG AK+VA+ L+ M G+ + ELNRY
Sbjct: 377 PIHTILHAVTLVALSGLISRVWVEFSGEGAKEVAEMLETNGWCMPGYMTKGALQRELNRY 436
Query: 507 IPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVT 400
IPTAA GGL +G + AD GAIGSGTGILLA T
Sbjct: 437 IPTAALAGGLILGFVGFCADIFGAIGSGTGILLAAT 472
>UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=10;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Methanococcus vannielii
Length = 438
Score = 81.8 bits (193), Expect = 2e-14
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHR--DNSMIHELNR 511
P+HA+ Y L M C F W++ SG AK +AK+L M ++G R S+ L R
Sbjct: 314 PLHAIFYTLMMVIFCILFGLFWVETSGLDAKSMAKKLGNLDMAIKGFRKSQKSIEQRLKR 373
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YI G +G L+ ADF GA+G GTG+LL V+I
Sbjct: 374 YIKPITVMGSAFVGFLAAAADFTGALGGGTGVLLTVSI 411
>UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 485
Score = 79.8 bits (188), Expect = 8e-14
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = -3
Query: 681 VHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIP 502
+ +LY ++ C FSK W ++SGS+ KDVAKQ + Q +V+ G R S EL + IP
Sbjct: 367 IKMVLYSVYTIVGCTLFSKYWAEISGSAPKDVAKQFQAQSIVIVGQRAQSAPRELAKVIP 426
Query: 501 TAAAFGGLCIGALSVLADFLGAIG-SGTGILLAVT 400
AAA GG +GA+ D G +G S +++AVT
Sbjct: 427 VAAAVGGAVVGAIVAFCDIFGGLGASAAPMIVAVT 461
>UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=2;
Thermoprotei|Rep: Preprotein translocase secY subunit -
Cenarchaeum symbiosum
Length = 478
Score = 79.4 bits (187), Expect = 1e-13
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
P+ A+ YVLFM G F K W+++ G S K AK L + + + G R ++ E LN+
Sbjct: 354 PMRAVGYVLFMIGIVVVFGKLWVELGGLSPKSAAKNLLDADVQIPGFRRSNQPIEVLLNK 413
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITL 391
YIP+ G + +GAL+ +D LG GSG GILL V I +
Sbjct: 414 YIPSVTIIGSMILGALAGASDVLGVFGSGIGILLMVDILI 453
>UniRef50_A3GFV9 Cluster: Protein involved in co-translational
pathway of protein transport; n=6;
Saccharomycetales|Rep: Protein involved in
co-translational pathway of protein transport - Pichia
stipitis (Yeast)
Length = 501
Score = 78.6 bits (185), Expect = 2e-13
Identities = 34/109 (31%), Positives = 63/109 (57%)
Frame = -3
Query: 687 TPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRY 508
+P+ ++Y + +F++ W +SGS+ KD++KQ K+Q + + G RD S+ EL+R
Sbjct: 374 SPIRTVVYSATVIVLATWFAEKWSYISGSAPKDISKQFKDQGISISGKRDISITKELSRV 433
Query: 507 IPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITLAITKXIHVQF 361
IP AA GG + A++V D LG +G ++ V+ ++ + V++
Sbjct: 434 IPVAAVSGGFILAAIAVAGDLLGGLGKSAATIVGVSAAFSVLEEFMVEY 482
>UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=2;
environmental samples|Rep: Preprotein translocase
subunit SecY - uncultured marine group II euryarchaeote
HF70_59C08
Length = 604
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -3
Query: 702 HTXHXTPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIH 523
H+ +H + YV M F+K WI+ + AKDVAKQ++ M + G R N +
Sbjct: 472 HSLWQVVLHVITYVTVMTLGSMMFAKFWIETTNMGAKDVAKQIENTGMQIPGFRKNPKVL 531
Query: 522 E--LNRYIPTAAAFGGLCIGALSVLADFLGAIG--SGTGILLAVTITL 391
E L RYIP F G +G L+ AD LG +G +GTG+LLAV I L
Sbjct: 532 ERILMRYIPPVTLFSGAFVGLLAAGADLLGTVGNATGTGLLLAVGIIL 579
>UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_136,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 77.4 bits (182), Expect = 4e-13
Identities = 47/96 (48%), Positives = 57/96 (59%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P++ +LY F+ G CA SKTWIDVSGSS +VAKQLKEQ M + G+RD+SM L
Sbjct: 264 PINKVLYTAFIHGICAVLSKTWIDVSGSSPNEVAKQLKEQDMKIVGYRDSSMKDVLYDIF 323
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
+ L + L AIGSGT ILL VTI
Sbjct: 324 QS----------LLPSVECALEAIGSGTNILLQVTI 349
>UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n=2;
Methanococcus|Rep: Preprotein translocase, SecY subunit
- Methanococcus aeolicus Nankai-3
Length = 443
Score = 77.0 bits (181), Expect = 6e-13
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHR--DNSMIHELNR 511
P+ A++Y + M C F W++ SG AK +AK++ M ++G R + S+ + L R
Sbjct: 320 PIRAIIYTILMIIFCIIFGMFWVETSGLDAKSMAKKMGSMNMAIKGFRKSNKSIENRLKR 379
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YI +G L+ ADF+GA+G GTG+LL V+I
Sbjct: 380 YILPITVMSSAFVGLLASGADFMGALGGGTGVLLTVSI 417
>UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=4;
Thermococcaceae|Rep: Preprotein translocase subunit secY
- Pyrococcus furiosus
Length = 468
Score = 76.2 bits (179), Expect = 1e-12
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
PV A++Y++ F W++++G A+ +A+QL+ + + G R + E L R
Sbjct: 345 PVRAIVYLILTVIFSLLFGYLWVELTGLDARSIARQLQRAGLQIPGFRRDPRTLEKVLQR 404
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YIP +G L + ++VLADFLGA+G+GTGILL V I
Sbjct: 405 YIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGI 442
>UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=5;
Thermoplasmatales|Rep: Preprotein translocase secY
subunit - Picrophilus torridus
Length = 587
Score = 73.7 bits (173), Expect = 5e-12
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -3
Query: 702 HTXHXTPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIH 523
HT +H + ++ FM F+K WI+ + A VAKQ++ M + G R + +
Sbjct: 455 HTPLEEVIHVIAFLAFMIIFSIIFAKFWIETTNMGAGAVAKQIQSSGMQIPGFRRDPRVM 514
Query: 522 E--LNRYIPTAAAFGGLCIGALSVLADFLGAIG--SGTGILLAVTITL 391
E L++YIP F G +G L+ AD +G +G SGTG+LLAV I +
Sbjct: 515 ERVLSKYIPAITVFSGAVVGLLAAAADLIGTVGDTSGTGLLLAVGIVI 562
>UniRef50_A3C0K6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 215
Score = 73.3 bits (172), Expect = 7e-12
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = -3
Query: 567 QQMVMRG--HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
Q++ + G RD ++ L+RYI TAAA GGLC+GAL++LAD GAIGSGTGILLA T+
Sbjct: 145 QRLALHGARERDAALRSHLSRYISTAAALGGLCVGALTILADMTGAIGSGTGILLAATV 203
>UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2;
Apansporoblastina|Rep: ER PROTEIN-TRANSLOCATION COMPLEX
- Encephalitozoon cuniculi
Length = 410
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/96 (34%), Positives = 60/96 (62%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P+ ++Y+ M + A S +W++++ S + A++LKE +M ++G R+ + + L+RYI
Sbjct: 292 PLRFVIYLAIMFLTSAILSTSWLELNELSPEKAAQKLKESRMRLKGVREANTANVLSRYI 351
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
PTAA GG+ + ++++ IGSGT I LA +I
Sbjct: 352 PTAAFLGGMLTSMVVIMSNLFDTIGSGTNIFLATSI 387
>UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7;
Saccharomycetales|Rep: Sec sixty-one protein homolog -
Saccharomyces cerevisiae (Baker's yeast)
Length = 490
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/119 (27%), Positives = 66/119 (55%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P+ + Y F+ + +F+ W +SGSSA+DVA + K+Q + + G R+ ++ ELN+ I
Sbjct: 364 PLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQNVAKELNKVI 423
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITLAITKXIHVQFXNASDRTXXXQ 328
P AA G + ++V+ + LG G GI++ + ++ + I +++ + ++ Q
Sbjct: 424 PIAAVTGASVLSLITVIGESLGLKGKAAGIVVGIAGGFSLLEVITIEYQQSGGQSALNQ 482
>UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=44;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Archaeoglobus fulgidus
Length = 493
Score = 70.5 bits (165), Expect = 5e-11
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Frame = -3
Query: 681 VHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNRY 508
+H L+ L + F+ W++ SG A+ VA Q+ + M + G R + + E L+RY
Sbjct: 367 LHLLIDALILVVGGIIFAWFWVETSGMDARTVASQIAKSGMQVPGFRKSPQVLERVLSRY 426
Query: 507 IPTAAAFGGLCIGALSVLADFLGAIG--SGTGILLAVTI 397
IP GG IG L+++A+ LG IG SGTG+LLAV+I
Sbjct: 427 IPKVTILGGAIIGILTLVANMLGTIGNVSGTGLLLAVSI 465
>UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=4;
Methanomicrobiales|Rep: Preprotein translocase secY
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 479
Score = 70.1 bits (164), Expect = 6e-11
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Frame = -3
Query: 639 AFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGA 466
A F+ W+ +G +K VA+Q++ M + G+R N + E L+RYIP GG+ IG
Sbjct: 368 AIFALFWVKTAGLDSKAVARQIQLSGMSIPGYRRNPAVLEKVLDRYIPRVTVIGGVFIGI 427
Query: 465 LSVLADFLGAIG--SGTGILLAVTITLAITKXI 373
+SV+A+ G IG SGTG+LL V+IT + + I
Sbjct: 428 MSVVANLFGVIGAVSGTGLLLTVSITYRLYEQI 460
>UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0512000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 466
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = -3
Query: 693 HXTPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKD---VAKQLKEQQMVMRGHRDNSMIH 523
H P HA +YV F+ SC F S + + S V ++E++ + D+ +
Sbjct: 348 HRDPFHAFIYVAFVLISCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHAN 407
Query: 522 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVT 400
E+ R++ AA GG C G L + AD +G SGTGI+LAVT
Sbjct: 408 EIRRHVMRAACVGGFCAGVLIIFADLIGVFCSGTGIMLAVT 448
>UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=4;
Sulfolobaceae|Rep: Preprotein translocase subunit secY -
Sulfolobus solfataricus
Length = 469
Score = 66.9 bits (156), Expect = 6e-10
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
P+ AL Y + F W+DV+G A+QL E + + G R+N I E L R
Sbjct: 346 PLGALEYAVVFIVLSILFGILWVDVAGLDPATQAQQLVEAGIEIPGVRNNPKIIEGILAR 405
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITL 391
YI A F + +G ++V A LGA G+G GILLAVTI +
Sbjct: 406 YIYPLAFFSSIIVGLIAVFATLLGAYGTGIGILLAVTIAI 445
>UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n=1;
Staphylothermus marinus F1|Rep: Preprotein translocase,
SecY subunit - Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1)
Length = 476
Score = 66.1 bits (154), Expect = 1e-09
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
P+ A++Y + + F W+++SG SA A++L + M + G R N I E L+R
Sbjct: 353 PMQAVIYAVSVLFLATLFGIMWVEISGLSASAQAEELIKSGMEIPGIRRNPKILERILSR 412
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YI L + ++V AD +GA G+GTGILLAV I
Sbjct: 413 YIFPLTVLSSLIVALIAVTADLMGAYGTGTGILLAVGI 450
>UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C19G7.17 - Schizosaccharomyces pombe (Fission yeast)
Length = 475
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/99 (32%), Positives = 53/99 (53%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
PVH ++Y + + +FS W++ + +DV KE Q+V+ G+R+ +M+ EL + I
Sbjct: 362 PVHTVIYTITLICITIYFSLLWMNATAGGPRDVLLFFKENQLVIAGYREATMLKELEKII 421
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITLA 388
P AA + LSV+A A G G+L+A + A
Sbjct: 422 PIAAKLSAFFVSILSVIAGIF-ASTFGVGVLIASALVYA 459
>UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n=6;
Euryarchaeota|Rep: Preprotein translocase, SecY subunit
- Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 537
Score = 63.3 bits (147), Expect = 7e-09
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Frame = -3
Query: 681 VHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNRY 508
+H L F+ F+ WI+ +G AK +A ++ + + G+R + + E + RY
Sbjct: 411 LHLLTDTAFLIIGGIIFAIFWIETTGMGAKSIAAKIHASGLQIPGYRRSPVSIERLMERY 470
Query: 507 IPTAAAFGGLCIGALSVLADFLGAIG--SGTGILLAVTITLAITKXI 373
IP GG IG L+V+A LG +G GTG+LLAV+I + + I
Sbjct: 471 IPKVTVIGGAIIGLLTVIASLLGTLGGAGGTGLLLAVSIMYRLYEQI 517
>UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n=1;
Thermofilum pendens Hrk 5|Rep: Preprotein translocase,
SecY subunit - Thermofilum pendens (strain Hrk 5)
Length = 476
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMI--HELNR 511
PVH ++Y L G F WI SG + A+QL + Q+ + G R + + L R
Sbjct: 353 PVHLVVYSLLYIGFAVLFGVAWILTSGMDPETQAEQLAKAQLQIPGFRKSEKVIASMLKR 412
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YI + IG ++V++D +G GTGILL V I
Sbjct: 413 YIWGLTILSSIIIGVIAVVSDIFRVMGGGTGILLLVGI 450
>UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=1;
Caldivirga maquilingensis IC-167|Rep: Preprotein
translocase secY subunit - Caldivirga maquilingensis
IC-167
Length = 482
Score = 56.8 bits (131), Expect = 6e-07
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = -3
Query: 687 TPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDN--SMIHELN 514
TP + ++++L F+ W++++G SA+D A+ + + + G R + S+ L
Sbjct: 357 TPQYVVVHILMYVVLSVVFAYLWVNLAGLSAEDQARTMVSSGLSIPGFRASARSLAVHLK 416
Query: 513 RYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITL 391
RY+ + GL G ++ L D LG G+G G++L V I +
Sbjct: 417 RYVNSLTFTSGLLAGFIAALGDVLGVYGTGIGLILMVEIII 457
>UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=1;
Aeropyrum pernix|Rep: Preprotein translocase subunit
secY - Aeropyrum pernix
Length = 457
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
PV +++ F W++++G + ++ A++L + + + G R + + E L R
Sbjct: 331 PVKTAVFIASWTVLSIVFGYMWVEIAGLNPREQAERLIKGGLAIPGMRSDPRVLERVLRR 390
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YI L + AL ++AD GA G+GTG+LLAV I
Sbjct: 391 YIYPLTFLSSLIVAALVIVADIFGAYGTGTGLLLAVGI 428
>UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=4;
Pyrobaculum|Rep: Preprotein translocase secY subunit -
Pyrobaculum aerophilum
Length = 459
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
P L Y++++ + AF + W+ ++G SA+D A+Q Q+ + G R + I L R
Sbjct: 338 PALVLHYLIYVALAIAF-AWVWVQLAGLSAEDQARQFARSQLHVPGFRQSEKILAKILER 396
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITL 391
I G G+ + L + LG G GTG++L V I L
Sbjct: 397 PINALTIISGFIAGSFAALGNILGVWGGGTGLILLVEIAL 436
>UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=1;
Hyperthermus butylicus DSM 5456|Rep: Preprotein
translocase subunit secY - Hyperthermus butylicus
(strain DSM 5456 / JCM 9403)
Length = 464
Score = 53.6 bits (123), Expect = 6e-06
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
P+ L + L F W++++G S + A+ L + M + G R N + E L R
Sbjct: 341 PLRTLTFALAWLALGLLFGFIWVEIAGLSPRQQAENLIKSGMELPGIRKNVKLLERILAR 400
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YI L + +++LAD GA G+G+G++L V I
Sbjct: 401 YIYPLTVISSLLVTTMAILADVFGAYGTGSGLVLLVGI 438
>UniRef50_A7QN16 Cluster: Chromosome undetermined scaffold_129,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_129, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 116
Score = 50.4 bits (115), Expect = 6e-05
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLK 571
P HA Y+LFM +C F KTWI+V S A +V KQLK
Sbjct: 78 PFHAFFYILFMFAACTLFEKTWIEVCRSYATNVVKQLK 115
>UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 546
Score = 50.4 bits (115), Expect = 6e-05
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Frame = -3
Query: 675 ALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMI---------H 523
+LLY +F+ CAF S V S+K +L + R D+ +
Sbjct: 312 SLLYAVFLLTGCAFLSLFCFKVCAKSSKRYLVRLVGKPKQTRLSPDDEQLPDEDESISPK 371
Query: 522 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITLAITK 379
+ RY+ AA F G C+G LS+LA FLG G I+LAVT+ ++ +
Sbjct: 372 QCRRYMTIAAIFVGFCVGFLSLLAGFLGL--DGPAIMLAVTVIHSVVQ 417
>UniRef50_UPI00015BB126 Cluster: protein translocase subunit
secY/sec61 alpha; n=1; Ignicoccus hospitalis KIN4/I|Rep:
protein translocase subunit secY/sec61 alpha -
Ignicoccus hospitalis KIN4/I
Length = 479
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHE--LNR 511
P+ Y + + F W++++G K A+ L E + + G R + E L +
Sbjct: 356 PLRMFTYGIALTALSVAFGYLWVELAGLDPKTQARNLIESGLHVPGARSDPRHLEKILAK 415
Query: 510 YIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
YI + + L ++AD GA G+GTG+LLA I
Sbjct: 416 YIYPLTILSSIIVALLVIVADIFGAYGTGTGLLLATMI 453
>UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:
NEQ168 - Nanoarchaeum equitans
Length = 476
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = -3
Query: 660 LFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMI-HELNRYIPTAAAFG 484
LF GS FS ++ +G ++ +AKQL + + RD +I H L++ IP G
Sbjct: 363 LFFLGSSILFSIYFVLATGQDSEGLAKQLSKMFGRIGLKRDYRIIKHYLDKIIPCVTVLG 422
Query: 483 GLCIGALSVLADFLGAIGSGTGILLAVTITLAI 385
G +G L++L+ ++ GT ILLA I+ +
Sbjct: 423 GFIVGFLALLSYWVSIPIGGTSILLATMISYMV 455
>UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit
containing protein; n=3; Oryza sativa|Rep: Preprotein
translocase, SecY subunit containing protein - Oryza
sativa subsp. japonica (Rice)
Length = 461
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 681 VHALL-YVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRD-NSMIHELNRY 508
+H LL + +F+ SC S W + S SSA++ +++ G+ + ++R
Sbjct: 350 IHELLIHSVFVVASCTLLSMAWAEASRSSAREF-----RTRVIGTGYFVWDETSRRIDRV 404
Query: 507 IPTAAAFGGLCIGALSVLADFLGAIG-SGTGILLAVTI 397
I AAA GG +G L+V A +GAIG +G +L AV +
Sbjct: 405 IAAAAAVGGFAVGGLAVYAGAVGAIGEAGPELLFAVLV 442
>UniRef50_Q7QS31 Cluster: GLP_661_12509_12237; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_12509_12237 - Giardia lamblia
ATCC 50803
Length = 90
Score = 46.4 bits (105), Expect = 9e-04
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 380 FVMARVMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAVGM*RFSS 523
++ RV V AS +PVP+P+AP+ SA P PP AAVGM FSS
Sbjct: 43 YIFTRV-VAASKMPVPDPIAPKMSAQNPTNPSIRPPARAAVGMYLFSS 89
>UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 384
Score = 45.6 bits (103), Expect = 0.002
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -3
Query: 579 QLKEQQMVMRGHRDNSMIHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 403
++ +Q++ D S+ R+ T AA+ G+C+G L++LA F+G GSG I+LAV
Sbjct: 305 RVSPEQLLQEHDEDESISPRRCRHYMTMAAYIVGICVGLLNLLAGFMGLGGSGPAIMLAV 364
Query: 402 TI 397
T+
Sbjct: 365 TV 366
>UniRef50_Q3JX83 Cluster: Putative uncharacterized protein; n=3;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 713
Score = 38.7 bits (86), Expect = 0.18
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -2
Query: 562 DGDARSPRQLHDPRTEPLHPDGGRVRRTV--HRGSVSAGRLPRGHRLRH--WDTARRH-H 398
D AR R R H D RVR R GR+PR RLRH D AR H
Sbjct: 398 DHRARDARHDLGRRDGQRHADAHRVRHAAVRRRRRERDGRVPRLRRLRHVLEDEARAHAA 457
Query: 397 HPSHYKXDSRAIXQCVRSD 341
P H + D A+ Q +R D
Sbjct: 458 APEHARDDRAAVRQALRGD 476
>UniRef50_A5C0J8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 371
Score = 37.1 bits (82), Expect = 0.55
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -3
Query: 573 KEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAV 403
KEQQ+VM G + +L + A + I AL L + + AIGSG GILLAV
Sbjct: 309 KEQQIVMTGDQVEDSQKDLIYSLKVAGFVRNMYIVALIGLVEPMEAIGSGAGILLAV 365
>UniRef50_Q2HBA1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 550
Score = 37.1 bits (82), Expect = 0.55
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 583 ETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHR 470
E G D+RSP+QL+D R P++P+ R+ R V R
Sbjct: 19 EVVPGEGPEDSRSPQQLYDERGRPINPETKRINRDVIR 56
>UniRef50_Q398T9 Cluster: Two component transcriptional regulator,
winged helix family; n=6; Proteobacteria|Rep: Two
component transcriptional regulator, winged helix family
- Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 395
Score = 36.7 bits (81), Expect = 0.72
Identities = 25/70 (35%), Positives = 30/70 (42%)
Frame = -2
Query: 595 QRCGETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLRHWD 416
+RC T A D R+ HD R + HP GR R + R RLRH
Sbjct: 73 RRCTRRTRADAIADPLRQRE-HDARRQA-HPRAGRRGHADGRAAFRRNR-HAAQRLRHAR 129
Query: 415 TARRHHHPSH 386
ARR H P+H
Sbjct: 130 AARRFHAPAH 139
>UniRef50_Q9C2B1 Cluster: Putative uncharacterized protein
B11N2.170; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B11N2.170 - Neurospora crassa
Length = 599
Score = 34.7 bits (76), Expect = 2.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 583 ETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHR 470
E EGT + +P QL+D R P++P+ R+ R + R
Sbjct: 18 EVVEGTGEPQPGAPEQLYDDRGRPVNPETRRINRDIIR 55
>UniRef50_A6QYP0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 367
Score = 34.7 bits (76), Expect = 2.9
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = -2
Query: 589 CGETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRL---PRGHRLRHW 419
C E+ G + PR P T P HPD T S+S R P+GH+ +
Sbjct: 250 CPESDAGDESPTHKPPRARTQPVTRPYHPDADASETTKKADSLSHFRQESEPKGHKEQKN 309
Query: 418 DTARRHHHPSH 386
T H H +H
Sbjct: 310 LTVDFHSHLTH 320
>UniRef50_A4MGD6 Cluster: YaeQ protein family; n=2; Burkholderia
pseudomallei|Rep: YaeQ protein family - Burkholderia
pseudomallei 305
Length = 127
Score = 33.5 bits (73), Expect = 6.8
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 553 ARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLR 425
A +PR L PR P+ P GGR + G+++ RL R R
Sbjct: 6 AHAPRILDAPRNRPIQPSGGRFGKRAIDGAIAHRRLRRAASCR 48
>UniRef50_Q4Q8V2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 927
Score = 33.5 bits (73), Expect = 6.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 411 AVSQCRSRWPRGSRPALTEPRCTVLRTRPPSGCSG 515
++ Q SR+ RG+ P+L RC PPS C G
Sbjct: 107 SLPQSFSRYERGAAPSLPRTRCATSLPLPPSACGG 141
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 33.1 bits (72), Expect = 8.9
Identities = 22/40 (55%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 505 PDGGRVRRTVHRGSVSAGRLPRGHR-LRHWDTARRHHHPS 389
PD R RRTVHR A R RG R LRH RRH HP+
Sbjct: 360 PDVPRRRRTVHRRPRGAQR-ERGRRGLRH--PLRRHRHPA 396
>UniRef50_A5NNR1 Cluster: LigA; n=2; cellular organisms|Rep: LigA -
Methylobacterium sp. 4-46
Length = 1001
Score = 33.1 bits (72), Expect = 8.9
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 571 GTADGDARSPR--QLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLRHW-DTARRH 401
G A R PR ++ DP +PL P+G R R G RGH R AR+H
Sbjct: 870 GGAAPRRRQPRDGRVRDP--DPLRPEGDRARLGADGADARLGP-RRGHPPRRGAGAARQH 926
Query: 400 HHPSH 386
HH H
Sbjct: 927 HHADH 931
>UniRef50_A0TSH0 Cluster: LigA; n=1; Burkholderia cenocepacia
MC0-3|Rep: LigA - Burkholderia cenocepacia MC0-3
Length = 1009
Score = 33.1 bits (72), Expect = 8.9
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -2
Query: 571 GTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGH----RLRHWDTARR 404
G A + S +LHD E P G RR+V G++ A R PR RLRH R
Sbjct: 4 GFAGDNEVSKGELHDGDVEYQQPAGRDRRRSVDAGALGAARQPRADRHQVRLRHRRLRRL 63
Query: 403 H 401
H
Sbjct: 64 H 64
>UniRef50_A0K0B2 Cluster: Major facilitator superfamily MFS_1; n=1;
Arthrobacter sp. FB24|Rep: Major facilitator superfamily
MFS_1 - Arthrobacter sp. (strain FB24)
Length = 496
Score = 33.1 bits (72), Expect = 8.9
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 534 SMIHELNRYIPTAA-AFGGLCIGALSVLADFLGAIGSGTGILLAVTITL 391
SMI + R I AA AFGGL L V FL G+G + LA+ +T+
Sbjct: 365 SMIGGMTRAITIAALAFGGLLGALLPVRTGFLLIGGTGAAVSLAIAVTV 413
>UniRef50_Q0J844 Cluster: Os08g0137800 protein; n=12; Oryza
sativa|Rep: Os08g0137800 protein - Oryza sativa subsp.
japonica (Rice)
Length = 190
Score = 33.1 bits (72), Expect = 8.9
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 362 NCT*IXFVMARVMVTASSIPVPEPMAPRKSASTDRAPMHSPPNA 493
+CT V +V S P P PM PR T AP PP A
Sbjct: 112 HCTGGMKVAVKVEAATGSNPAPSPMTPRPRTPTAMAPNAMPPTA 155
>UniRef50_O48671 Cluster: Protein RER1B; n=11; Magnoliophyta|Rep:
Protein RER1B - Arabidopsis thaliana (Mouse-ear cress)
Length = 195
Score = 33.1 bits (72), Expect = 8.9
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 609 SGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIG 430
SGS A V K++ E V + + D + H NR+I T F C+ S+ ++ + G
Sbjct: 8 SGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGFYIISYG 67
Query: 429 SGTGIL 412
G +L
Sbjct: 68 LGIYLL 73
>UniRef50_P29070 Cluster: Chitin synthase 1; n=8;
Pezizomycotina|Rep: Chitin synthase 1 - Neurospora
crassa
Length = 917
Score = 33.1 bits (72), Expect = 8.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 708 PXHTXHXTPVHALLYVLFMXGSCAFFSKTWIDVS-GSSAKDVAKQLKEQQMVMRGHRDNS 532
P H H P + LL ++ + W DVS G+ D A+ L V +G +D +
Sbjct: 739 PWHMFHSFPYYMLLMSTYINILMIYAFNNWHDVSWGTKGSDKAEALPSAN-VSKGEKDEA 797
Query: 531 MIHELNR 511
++ E+ +
Sbjct: 798 VVEEIEK 804
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,496,032
Number of Sequences: 1657284
Number of extensions: 8132497
Number of successful extensions: 32823
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 30811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32746
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -