Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D05
(839 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 167 1e-41
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 167 1e-41
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 167 1e-41
09_04_0707 + 19645471-19646112 111 9e-25
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 62 4e-10
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 50 2e-06
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 48 7e-06
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 46 5e-05
08_01_0259 + 2123393-2123555,2123670-2124070 33 0.28
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 31 1.1
01_05_0278 - 20313373-20313387,20314617-20315240 31 1.1
02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356 30 2.0
02_05_0593 - 30217432-30218232 30 2.6
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 29 4.6
04_01_0122 + 1267048-1267149,1267764-1267855,1268137-1268234,126... 29 4.6
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 4.6
08_01_0260 + 2127396-2127962 29 6.1
02_05_0616 - 30380558-30380822,30380914-30381045,30381138-303812... 29 6.1
06_01_1018 - 7964752-7964847,7964976-7967048 28 8.1
04_04_0869 - 28883688-28884983 28 8.1
01_06_1229 + 35551522-35552169 28 8.1
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 167 bits (405), Expect = 1e-41
Identities = 78/96 (81%), Positives = 88/96 (91%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P HAL YV+FM +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++ ELNRYI
Sbjct: 369 PFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYI 428
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
PTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTI
Sbjct: 429 PTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTI 464
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 167 bits (405), Expect = 1e-41
Identities = 78/96 (81%), Positives = 88/96 (91%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P HAL YV+FM +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++ ELNRYI
Sbjct: 369 PFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYI 428
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
PTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTI
Sbjct: 429 PTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTI 464
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 167 bits (405), Expect = 1e-41
Identities = 78/96 (81%), Positives = 88/96 (91%)
Frame = -3
Query: 684 PVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 505
P HAL YV+FM +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++ ELNRYI
Sbjct: 359 PFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYI 418
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
PTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTI
Sbjct: 419 PTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTI 454
>09_04_0707 + 19645471-19646112
Length = 213
Score = 111 bits (266), Expect = 9e-25
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Frame = -3
Query: 678 HALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRG--HRDNSMIHELNRYI 505
HA Y + SC FS W++VS SSA+DVA+QL Q++ + G RD ++ L+RYI
Sbjct: 106 HAAAYAASLLASCTLFSGAWVEVSRSSAQDVARQLSVQRLALHGARERDAALRSHLSRYI 165
Query: 504 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
TAAA GGLC+GAL++LAD GAIGSGTGILLA T+
Sbjct: 166 STAAALGGLCVGALTILADMTGAIGSGTGILLAATV 201
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = -3
Query: 693 HXTPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELN 514
H P HA +YV F+ SC F S + ++E++ + D+ +E+
Sbjct: 348 HRDPFHAFIYVAFVLISCVFIS-------------MGLMMQEERRLRLAQPDSIHANEIR 394
Query: 513 RYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVT 400
R++ AA GG C G L + AD +G SGTGI+LAVT
Sbjct: 395 RHVMRAACVGGFCAGVLIIFADLIGVFCSGTGIMLAVT 432
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 50.4 bits (115), Expect = 2e-06
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Frame = -3
Query: 675 ALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMI---------H 523
+LLY +F+ CAF S V S+K +L + R D+ +
Sbjct: 312 SLLYAVFLLTGCAFLSLFCFKVCAKSSKRYLVRLVGKPKQTRLSPDDEQLPDEDESISPK 371
Query: 522 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTITLAITK 379
+ RY+ AA F G C+G LS+LA FLG G I+LAVT+ ++ +
Sbjct: 372 QCRRYMTIAAIFVGFCVGFLSLLAGFLGL--DGPAIMLAVTVIHSVVQ 417
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 681 VHALL-YVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRD-NSMIHELNRY 508
+H LL + +F+ SC S W + S SSA++ +++ G+ + ++R
Sbjct: 372 IHELLIHSVFVVASCTLLSMAWAEASRSSAREF-----RTRVIGTGYFVWDETSRRIDRV 426
Query: 507 IPTAAAFGGLCIGALSVLADFLGAIG-SGTGILLAVTI 397
I AAA GG +G L+V A +GAIG +G +L AV +
Sbjct: 427 IAAAAAVGGFAVGGLAVYAGAVGAIGEAGPELLFAVLV 464
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -3
Query: 579 QLKEQQMVMRGHRDNSMIHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 403
++ +Q++ D S+ R+ T AA+ G+C+G L++LA F+G GSG I+LAV
Sbjct: 186 RVSPEQLLQEHDEDESISPRRCRHYMTMAAYIVGICVGLLNLLAGFMGLGGSGPAIMLAV 245
Query: 402 TI 397
T+
Sbjct: 246 TV 247
>08_01_0259 + 2123393-2123555,2123670-2124070
Length = 187
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 362 NCT*IXFVMARVMVTASSIPVPEPMAPRKSASTDRAPMHSPPNA 493
+CT V +V S P P PM PR T AP PP A
Sbjct: 109 HCTGGMKVAVKVEAATGSNPAPSPMTPRPRTPTAMAPNAMPPTA 152
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +2
Query: 383 VMARVMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAA 496
++ R+ + S P+P P +PR S+S+ R+P SPP+++
Sbjct: 105 LLRRLGLAHDSEPLPHP-SPRVSSSSPRSPTPSPPSSS 141
>01_05_0278 - 20313373-20313387,20314617-20315240
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 398 MVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAVG 505
M + S P P P +P +S + + MH PP+ AA G
Sbjct: 1 MGASCSSPFPPPPSPAESNAPSASAMHHPPHPAAGG 36
>02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356
Length = 444
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 413 SIPVPEPMAPRKSASTDRAPMHSPP 487
++ VPEP+ PR A P+H PP
Sbjct: 79 AVLVPEPLPPRTDAPMPEIPIHPPP 103
>02_05_0593 - 30217432-30218232
Length = 266
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 374 IXFVMARVMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAA 499
I + ++T+ + P K STD + H PPNA A
Sbjct: 163 ISVLQVSAVITSPAAEAPSSATESKPNSTDASSKHGPPNAGA 204
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 445 PRGHRLRHWDTARRHHHPSHYKXDSR 368
PR HR +H ++RHHH H+ R
Sbjct: 123 PRDHRDQHDHQSQRHHHRHHHHQRQR 148
>04_01_0122 +
1267048-1267149,1267764-1267855,1268137-1268234,
1268333-1268488,1268736-1269355,1269480-1269547,
1269848-1270099,1270390-1270525,1271054-1271246,
1271386-1271939
Length = 756
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 583 ETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAG 452
+ GT D + SPR +H T GG + V R ++AG
Sbjct: 198 DVPNGTLDTEVLSPRDVHGHGTHTASTAGGNIVHNVSRLGLAAG 241
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 404 TASSIPVPEPMAPRKSASTDRAPMHSPPNAAAV 502
+A +P P+P PR A D+AP+ P AAV
Sbjct: 184 SAPPLP-PQPPPPRNQAQADKAPIPVAPPGAAV 215
>08_01_0260 + 2127396-2127962
Length = 188
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 362 NCT*IXFVMARVMVTASSIPVPEPMAPRKSASTDRAPMHSPP 487
+CT V +V S P P P+AP T AP PP
Sbjct: 110 HCTAGMKVAVKVEAATGSNPTPSPLAPLPRTPTVMAPNAMPP 151
>02_05_0616 -
30380558-30380822,30380914-30381045,30381138-30381279,
30381377-30381569,30381657-30381890,30381992-30382189
Length = 387
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 386 MARVMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAV 502
MA + V+A P P P AS RAP + P AAA+
Sbjct: 1 MAPLSVSAILAPSPPPAQAAARASPRRAPASAAPVAAAI 39
>06_01_1018 - 7964752-7964847,7964976-7967048
Length = 722
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 389 ARVMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAA-VGM 508
A + VT + + VP P P S + D +P+ + +AAA VG+
Sbjct: 225 AAIDVTLAPVEVPRPRRPLLSVAVDLSPVVAAADAAAYVGL 265
>04_04_0869 - 28883688-28884983
Length = 431
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 413 SIPVPEPMAPRKSASTDRAPMHSPP 487
S P P P A K ++P HSPP
Sbjct: 354 SSPAPSPKAAGKKKKKGKSPSHSPP 378
>01_06_1229 + 35551522-35552169
Length = 215
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 535 LHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLR 425
+HDPR P+HP + T G + GR+ G R R
Sbjct: 1 MHDPRGFPIHPQPYHLHPTA--GGLGEGRMRGGGRRR 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,957,082
Number of Sequences: 37544
Number of extensions: 256497
Number of successful extensions: 1147
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -