Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D05
         (839 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-10|CAB16516.1|  473|Caenorhabditis elegans Hypothetical p...   187   7e-48
U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical pr...    30   2.4  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z78198-7|CAB01573.1|  622|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z73102-12|CAA97406.1|  430|Caenorhabditis elegans Hypothetical p...    28   9.5  
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p...    28   9.5  

>Z99281-10|CAB16516.1|  473|Caenorhabditis elegans Hypothetical
           protein Y57G11C.15 protein.
          Length = 473

 Score =  187 bits (456), Expect = 7e-48
 Identities = 89/113 (78%), Positives = 96/113 (84%)
 Frame = -3

Query: 735 CXXTCPRRSPXHTXHXTPVHALLYVLFMXGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMV 556
           C    P  S  H     P+H ++Y++FM GSCAFFSKTWIDVSGSSAKDVAKQLKEQQMV
Sbjct: 339 CYYLSPPESLGHIFED-PIHCIIYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMV 397

Query: 555 MRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 397
           MRGHR+ SMIHELNRYIPTAAAFGGLCIGALSV ADF+GAIGSGTGILLAVTI
Sbjct: 398 MRGHREKSMIHELNRYIPTAAAFGGLCIGALSVTADFMGAIGSGTGILLAVTI 450


>U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical
           protein F01E11.5a protein.
          Length = 462

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/37 (35%), Positives = 26/37 (70%)
 Frame = -3

Query: 597 AKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAF 487
           AK  A+Q+  Q+ V+R H +++++HE++  +PT+  F
Sbjct: 213 AKHRARQIYRQK-VIRKHIESTILHEISHVLPTSDEF 248


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
           protein F54D11.2 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 407 ASSIPVPEPMAPRKSASTDRAPMHSPP 487
           A+  P PEP+ P K    + AP  S P
Sbjct: 206 AAETPAPEPLVPEKKPKIEDAPTTSSP 232


>Z78198-7|CAB01573.1|  622|Caenorhabditis elegans Hypothetical
           protein F55C5.8 protein.
          Length = 622

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 687 TPVHALLYVLFMXGSCAFFSKTWIDVSGS--SAKDVAKQLKE 568
           T + A  Y  +M G C+F S+ W   S S   AK V ++L E
Sbjct: 152 TKLEAQAYAAWMRGMCSFESRNWQKASESLKLAKTVYEKLAE 193


>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
            F18C12.2b protein.
          Length = 2271

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 581  FATSLAEEPDTSIQVFEKKAQEPXM 655
            FA SL + P+T++Q+F+  ++ P +
Sbjct: 1931 FADSLRDSPNTALQMFDSSSENPEL 1955


>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
            F18C12.2a protein.
          Length = 2279

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 581  FATSLAEEPDTSIQVFEKKAQEPXM 655
            FA SL + P+T++Q+F+  ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963


>Z73102-12|CAA97406.1|  430|Caenorhabditis elegans Hypothetical
           protein B0035.11 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 574 EGTADGDAR-SPRQLHDPRTEPLHPDGG 494
           E   D D+R +PRQL D   + +HP GG
Sbjct: 46  ESDDDDDSRPAPRQLSDSSDDNIHPRGG 73


>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
            protein RME-8 protein.
          Length = 2279

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 581  FATSLAEEPDTSIQVFEKKAQEPXM 655
            FA SL + P+T++Q+F+  ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,656,393
Number of Sequences: 27780
Number of extensions: 183600
Number of successful extensions: 667
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)