Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D04
(835 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0090 - 13391028-13391117,13391369-13391502,13391532-133916... 35 0.069
01_03_0241 - 14111286-14111935,14111992-14112115 33 0.21
02_05_0130 - 26070784-26070801,26071440-26072627 33 0.28
01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986... 33 0.28
05_01_0158 - 1067721-1067827,1067951-1068008,1068276-1068334,106... 32 0.49
03_02_0368 + 7840665-7841975 31 1.1
03_06_0217 - 32432590-32433495 30 2.6
02_05_0310 + 27769988-27770830 30 2.6
06_03_0093 - 16567817-16568077,16568613-16568710,16568770-16568968 29 3.5
05_04_0202 - 19010953-19013355 29 3.5
12_01_1114 + 11899808-11900089,11900278-11900451,11901269-11901604 29 4.6
10_08_0605 + 19158167-19158309,19158726-19158834,19159099-191592... 29 6.0
07_01_0504 + 3756714-3757054,3757205-3757259,3757403-3757477,375... 29 6.0
06_02_0155 + 12380452-12381012 29 6.0
04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215... 29 6.0
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 28 8.0
09_04_0748 + 19901687-19902460 28 8.0
07_02_0019 + 11877119-11879984,11880316-11880389,11881293-118815... 28 8.0
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 28 8.0
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 8.0
03_02_0268 - 6994095-6994555,6996873-6996982,6997237-6998612 28 8.0
02_02_0442 - 10318576-10319109 28 8.0
01_01_0483 - 3550429-3551184 28 8.0
>11_04_0090 -
13391028-13391117,13391369-13391502,13391532-13391659,
13391684-13391718,13391719-13392159
Length = 275
Score = 35.1 bits (77), Expect = 0.069
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 217 PMGQARGAPPSPWQVSLPSCPPAHTKLSCRRNLVP 321
P+ +A+ PP+ Q LP+ PP H LSC + P
Sbjct: 27 PLSRAKTPPPALLQAILPTAPPKHHSLSCSGSQAP 61
>01_03_0241 - 14111286-14111935,14111992-14112115
Length = 257
Score = 33.5 bits (73), Expect = 0.21
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
Frame = -2
Query: 417 GLQGRYAVITEENRNRYGAEPSL--QFAAAANQTWDQVPSARQFRVRRGTGGQGHLPGRR 244
G GR R R G E + A AA W A + R RRG+GG+G +
Sbjct: 141 GRCGREKTAAARARWRRGGEKGRGGEEATAARARWSSGKKAARARWRRGSGGEGEVELGE 200
Query: 243 WSPPGLSHR*QPLQVGRAGRLGHRVRAEGRARGLRQRGPHEVLGRPEDERV 91
G R + Q+ R G V +RG R+ G + G E+ V
Sbjct: 201 EGGKGEVERRRAAQIWGCRRRGELV-GGADSRGRRRGGAADGWGGGEEAAV 250
>02_05_0130 - 26070784-26070801,26071440-26072627
Length = 401
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 174 DAPGDQPGQLVAAVTYGTGQGG--STVALASVPAL 272
DAPG PG LV+ V G G G ALA++PA+
Sbjct: 228 DAPGRLPGSLVSVVARGNGFAGPLQAAALAALPAM 262
>01_01_1220 +
9862195-9862281,9862427-9862646,9862764-9862916,
9863016-9863674,9863749-9863852,9863950-9864192,
9864262-9864376,9864696-9864909,9864995-9865511,
9866439-9866448,9867363-9867551,9867755-9868084,
9868639-9868872,9869303-9869743
Length = 1171
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 156 VLLPAPDAPGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPG 284
V+LP DA D+P +VA+ + G GG T A+ P L++PG
Sbjct: 494 VILPTEDAKDDKPAPVVASFS-ARGPGGLTEAILK-PDLMAPG 534
>05_01_0158 -
1067721-1067827,1067951-1068008,1068276-1068334,
1069009-1069087,1069177-1069233,1069531-1069580,
1069805-1069886,1070431-1070487,1070741-1070828,
1071171-1071247,1071325-1071443,1071719-1071950
Length = 354
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 141 VDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGG 239
+ RGHV LP +PG P VAA + TG+GG
Sbjct: 28 IGRGHVALPP--SPGRYPAVTVAAASRRTGEGG 58
>03_02_0368 + 7840665-7841975
Length = 436
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 311 TWSQVWFAAAANCSEGSAPYRFRFSSVITAYLPWRPKTSFPQPLATQFLLVSK 469
TW +V + SEG + + S + + L W ++P+PL F L +K
Sbjct: 259 TWEEVLLHGTKHYSEGLSRFCDAKMSEVVSSLGWARARAWPEPLLQAFFLAAK 311
>03_06_0217 - 32432590-32433495
Length = 301
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 141 VDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGSTV-ALASVPALLSPGAHETVVQTEPG 317
V G +L APD PG ++ + + G G T A A+ P+ S T + G
Sbjct: 226 VSSGRAMLAAPDQPGAGRDDMIDMLNWRRGSHGPTASAAATTPSPASTTTTLTTFASADG 285
Query: 318 PKSGSLQQRI 347
+G + +
Sbjct: 286 SNNGEENEEL 295
>02_05_0310 + 27769988-27770830
Length = 280
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 179 GIGCGQKDVPAVYANVARMRSWVDRKMNAWGXRNHHLHY-LRHS 51
G GCG P ++ + R S +++ + +WG ++HH H+ +HS
Sbjct: 84 GGGCG----PESFSGLLRELSELEQSVASWGRKSHHQHHDKKHS 123
>06_03_0093 - 16567817-16568077,16568613-16568710,16568770-16568968
Length = 185
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = -2
Query: 342 AAAANQTWDQVPSARQFRVRRGT----GGQGHLPGRRWSPPGLSHR*QPLQVGRAGRLGH 175
AAA + + V +A + RVRRG GG G G RW S R + G + H
Sbjct: 9 AAAVDSATESVSAASESRVRRGEEVVGGGDG---GGRWRVLSWSSREATVDAGAV--VPH 63
Query: 174 RVRAEGRARGL--RQRGPHEVLGRPE 103
R E AR L RQ V+ PE
Sbjct: 64 VGRGENPARPLSDRQLWRSSVISPPE 89
>05_04_0202 - 19010953-19013355
Length = 800
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -3
Query: 368 MVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGL 189
+V PR L R RFR D V G D G GG ++ + +R + GL
Sbjct: 23 VVARPRRAGLACAARSCYRFRTDDDGVVDVAVSGEDGDGGGGGYAVSVEVPGTRGREGGL 82
Query: 188 VAWGIGCGQ 162
V G G+
Sbjct: 83 VLRASGSGE 91
>12_01_1114 + 11899808-11900089,11900278-11900451,11901269-11901604
Length = 263
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 279 GTGGQGHLP-GRRWSPPGLSHR*QPLQVGRAGRLGHRVRA-EGRARGLRQRGPHEVLGRP 106
G+GG P G+RW+ +HR + L G G R+RA +G R G +GRP
Sbjct: 19 GSGGGRERPHGQRWTAAAAAHR-EDLVSGGGGWGRRRLRATDGDLRPAAVDGEAPAVGRP 77
>10_08_0605 +
19158167-19158309,19158726-19158834,19159099-19159224,
19159388-19159543,19159623-19159805,19159904-19160020,
19160528-19160581,19160661-19160732,19160947-19161058,
19161188-19161284,19161434-19161528,19162093-19162167,
19162307-19162390,19162602-19162700,19163167-19163207
Length = 520
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 237 GSTVALASVPALLSPGAHETVVQTEPGPKSGSLQQRIAARVRHHIDFDF 383
G+ VA +V LL+PGA + P G AA R H+ F F
Sbjct: 7 GAAVAAVAVLLLLAPGAEPIGLWLPPPTGGGGRLGGAAAPGRFHVSFTF 55
>07_01_0504 +
3756714-3757054,3757205-3757259,3757403-3757477,
3757638-3757729,3757914-3757995,3758138-3758221,
3758326-3758445
Length = 282
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 190 WSPGASGAGRRTCPRSTPTWPA 125
WS G G GR P S P WPA
Sbjct: 33 WSNGGGGGGRLVAPPSAP-WPA 53
>06_02_0155 + 12380452-12381012
Length = 186
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +3
Query: 114 PRPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQ-GGSTVALASVPALLSPGAH 290
P PHAG G AP AP P V A TYG Q A P ++ P A+
Sbjct: 40 PPPHAGGAVNGNGGA---APPAPATSPDTEVRAPTYGDKQISPPKEGAAGKPPMVVPAAN 96
Query: 291 ETVVQT 308
T
Sbjct: 97 HPQAPT 102
>04_04_1658 - 35119623-35119754,35121033-35121121,35121205-35121599,
35122009-35122091,35122163-35124184,35124859-35124927,
35125050-35125130,35125215-35125308,35125435-35125499,
35125961-35126038,35126115-35126360
Length = 1117
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 190 SPANL*RLSPMGQARGAPPSPWQVSLPSCPPAHTKLSCRRNLVPSLVRCSSELQRG 357
SP+++ G+A+GAPP P + P+ A +C R + PS V S + + G
Sbjct: 985 SPSDMAPGKQRGKAKGAPPPP---AAPNAAAAGGFPACLRLMPPSTVAISIQAKPG 1037
>11_06_0093 +
19999503-20000231,20000308-20000742,20000829-20001670,
20001748-20001916
Length = 724
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 408 GRYAVITEENRNRYGAEPSLQFAAAANQTWDQVPSARQFRVRRGTGG 268
G+YA IT+ + + A S + + NQT+ + + R GTGG
Sbjct: 135 GKYAFITQPVWDEFHAAKSTKESREKNQTYHDLQARNLHPHRLGTGG 181
>09_04_0748 + 19901687-19902460
Length = 257
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 195 GQLVAAVTYGTGQ--GGSTVALASVPALLSPGAHETVVQTEPGP 320
G+L V G G+ GG VAL +PA LSP ++ PGP
Sbjct: 167 GRLRVPVEAGDGEDGGGGAVALPGLPA-LSPEGLPWFIKVGPGP 209
>07_02_0019 +
11877119-11879984,11880316-11880389,11881293-11881511,
11881557-11881679,11881759-11881859,11881938-11881990,
11882084-11882269,11882677-11882894
Length = 1279
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +3
Query: 171 PDAPGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVVQTEPGPKSGSLQQRIA 350
PDA + L++ + G V+ + +P+ LSP A ++V+ P P S L ++
Sbjct: 48 PDAVAAEVATLLSRCS---GDWRLAVSSSDLPSRLSPAAISSLVRRRPSPSSPRLHPKLL 104
Query: 351 ARVRHHIDFDFLQLSPRICP 410
+DF F SP++ P
Sbjct: 105 ------LDF-FYWSSPQLAP 117
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 145 TAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVS-LPSCPPAH 288
T F P P+ PA L P + PP P LP PP H
Sbjct: 699 TKSVGFAPPPLQPPARPAQHPHLQPPARPAQQPPRPPVTQPLPPPPPLH 747
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = -2
Query: 276 TGGQGHLPGRRWSPPGLSHR*QPLQVGRAGRLGHRVRAEGRARGLRQRGPHEVLGRPEDE 97
+GG G G W+ PG P R++ EG A R G E + E
Sbjct: 117 SGGGGGRGGNVWAQPGRGRGGAPAPAPAPAPAARRIQDEGAA---RSSGTVERIASTEVV 173
Query: 96 RVGLXEPPLTLFKT 55
RV PP+ + ++
Sbjct: 174 RVQPPAPPVAVSRS 187
>03_02_0268 - 6994095-6994555,6996873-6996982,6997237-6998612
Length = 648
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -3
Query: 290 VCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWV 111
+ GG E D GDGG P+ + R + L A G G G + VPAV+ + V
Sbjct: 24 ILGGGPELGDAAAGDGGKQ---PV-ELRKMMDELDAAGDGGGDEAVPAVFICPISLEPMV 79
Query: 110 D 108
D
Sbjct: 80 D 80
>02_02_0442 - 10318576-10319109
Length = 177
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 201 VGRAGRLGHRVRAEGRARGLRQRGPHEVLGRPEDERVGLXEPP 73
+ + RLGH VR RA R+R PE + EPP
Sbjct: 88 IAASARLGHPVRRRRRAHRRRRRPSPPPSLSPEPSTAAVGEPP 130
>01_01_0483 - 3550429-3551184
Length = 251
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +3
Query: 129 GHVGVDRGHVLLPAPD--APGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVV 302
G VG+ + AP A PGQL AAV+ G GG + + + P H
Sbjct: 136 GEVGIPTALPVTAAPRLAAAMPAPGQLAAAVSAGMYGGGRRLGVIDGGGIAPPSPHTAGC 195
Query: 303 QTEPGPKSGSLQQRIA 350
+GS+ +A
Sbjct: 196 YYARNNNAGSIGADVA 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,161,571
Number of Sequences: 37544
Number of extensions: 556297
Number of successful extensions: 2297
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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