Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D04
(835 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 71 2e-12
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 70 3e-12
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 69 5e-12
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 68 1e-11
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 66 4e-11
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 65 6e-11
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 65 6e-11
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 65 8e-11
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 65 8e-11
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 64 2e-10
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 63 3e-10
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 62 4e-10
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 61 9e-10
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 60 3e-09
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 57 2e-08
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 57 2e-08
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 56 5e-08
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 55 6e-08
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 53 2e-07
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 52 6e-07
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 50 2e-06
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 50 2e-06
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 49 5e-06
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 48 9e-06
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 46 5e-05
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 44 2e-04
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 40 0.003
SB_24599| Best HMM Match : Complex1_24kDa (HMM E-Value=0) 39 0.006
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 38 0.010
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.018
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.031
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.054
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.054
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 33 0.22
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 33 0.22
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 4.6
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 29 4.6
SB_49278| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 28 8.1
SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_961| Best HMM Match : CUB (HMM E-Value=3.4e-08) 28 8.1
SB_726| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = -3
Query: 308 RLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANV 132
++H+S +CAG ++G D+CQGD G PL C + R+ L G+ +WG GC + VYA+V
Sbjct: 195 KIHESMLCAGLEQGGVDSCQGDSGGPLVCEDTNGRWHLEGVTSWGYGCAAPRMYGVYASV 254
Query: 131 ARMRSWVDRKMNAWGXRNHHLHYLRH 54
+R W++ M N+ ++H
Sbjct: 255 RYLRDWINGVMKGTVTGNYCTFLVKH 280
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 589 HTRRFNTKSLKNDVALLRMHAPFNLAEHINMICL 488
H + + ND+ALL++ P NL + +CL
Sbjct: 108 HKNYHSPIEMANDIALLKLENPANLVNGVGTVCL 141
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 70.5 bits (165), Expect = 2e-12
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAG-GQEGRDTCQGDGGAPLACPIGD 213
L ++E+D+V CN+ + GT ++D + CAG Q GRD+C GD G PL C D
Sbjct: 136 LNELEVDIVSKEVCNA--NDSYNGT---INDRYFCAGFPQGGRDSCGGDSGGPLVCSNAD 190
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMNAWGXRNHHLHYLRHSQNK 42
+Y L G+V+WG GC + VY +V R +++ + G + YL NK
Sbjct: 191 GQYVLRGVVSWGEGCARPKKYGVYLDVRRTLPFIEGTIQ--GYPKCGVRYLPPENNK 245
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 69.7 bits (163), Expect = 3e-12
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAG-GQEGRDTCQGDGGAPLACPIGD 213
+++ + +VP CN + + G+ +H +CAG Q G D CQ D G PL+C IG
Sbjct: 192 IREATVKLVPPEICNQV--ESYNGS---IHVRALCAGFDQGGVDACQFDSGGPLSCSIG- 245
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMNAW 90
SR+ L G+V+WG C + VYAN+ RM SWV R AW
Sbjct: 246 SRFYLTGVVSWGHECARPKKYGVYANMMRMTSWV-RDTIAW 285
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 68.9 bits (161), Expect = 5e-12
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = -3
Query: 305 LHDSFVCAGGQEGR-DTCQGDGGAPLAC--PIGDSRYKLAGLVAWGIGCGQKDVPAVYAN 135
++D +CAG + G+ D+C+GD G P C P SR+ L G V+WG+GC +K P +Y +
Sbjct: 608 INDKVICAGYEGGKIDSCKGDSGGPFVCKDPRVTSRFILHGAVSWGVGCARKGQPGIYTD 667
Query: 134 VARMRSWVD 108
+ + +W+D
Sbjct: 668 IKKYLNWID 676
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = -3
Query: 341 LLQRTRLGTRF--RLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIG 171
L+ +++ T + ++HDS +CAG G D CQGD G PL C + R+ + G +WG G
Sbjct: 101 LVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEY-NGRWHIEGATSWGYG 159
Query: 170 CGQKDVPAVYANVARMRSWVDRKMNA 93
C + VYA+V +++WV M A
Sbjct: 160 CASPNQYGVYAHVRYLKAWVQGIMGA 185
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = -3
Query: 308 RLHDSFVCAG-GQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANV 132
++HDS +CAG Q G DTCQGD G P+ C R+ + G +WG GC Q VYA+V
Sbjct: 863 KIHDSMLCAGLDQGGIDTCQGDSGGPMVCE-SRGRFYIHGATSWGYGCAQPGKFGVYAHV 921
Query: 131 ARMRSW 114
+ +W
Sbjct: 922 KNLVAW 927
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = -3
Query: 350 CNSLLQRTRLGTRFRLHDSFVCAGGQEGRDT-CQGDGGAPLACPIGDSRYKLAGLVAWGI 174
C +Q+ G ++ DS VCAG + C GD G P C D RY L G V+WG
Sbjct: 213 CKKKVQQAGFG--IQITDSMVCAGVPGSVVSGCHGDSGGPYVCIQPDGRYVLQGDVSWGS 270
Query: 173 G-CGQKDVPAVYANVARMRSWVDRKMN 96
G C + V+ VA R+W+DR M+
Sbjct: 271 GRCDSSQMFTVFGRVAHFRNWIDRHMS 297
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 65.3 bits (152), Expect = 6e-11
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAG-GQEGRDTCQGDGGAPLACPIGD 213
LK++++ +V CNS + + +H+ F+CAG Q G+D C GD G PL+C
Sbjct: 133 LKQLKVPLVNKSVCNSNNSYSGI-----IHEQFMCAGYNQGGQDGCLGDSGGPLSCQTES 187
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVD 108
+ L GL++WG C D VY +V RM +++
Sbjct: 188 GDWVLTGLMSWGEKCALPDKYGVYTDVRRMLPFIE 222
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 65.3 bits (152), Expect = 6e-11
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = -3
Query: 341 LLQRTRLGTRF--RLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIG 171
L+ +++ T + ++HDS +CAG G D CQGD G PL C R+ + G +WG G
Sbjct: 445 LVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEY-KGRWHIEGATSWGYG 503
Query: 170 CGQKDVPAVYANVARMRSWV 111
C + VYA+V +++WV
Sbjct: 504 CASPNQYGVYAHVRYLKAWV 523
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 64.9 bits (151), Expect = 8e-11
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -3
Query: 308 RLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANV 132
++HDS +CAG +G D CQGD G P+ C G R+ + G +WG GC + VYA V
Sbjct: 64 KIHDSMICAGIDKGGIDACQGDSGGPMVCENG-GRFYIHGATSWGYGCAAPGLYGVYAKV 122
Query: 131 ARMRSWVDRKM 99
+ W+ +M
Sbjct: 123 KYLLPWIKDEM 133
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 64.9 bits (151), Expect = 8e-11
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGD 213
L+++++ MVP CNS + +H+ +CAG +EG CQ D G PLAC G
Sbjct: 184 LREVQVHMVPRELCNSANSYGGV-----IHERALCAGPREGGCGPCQFDSGGPLACSEGG 238
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWV 111
Y + G+V++G+GCG + VY+N+ + WV
Sbjct: 239 LWY-MYGIVSYGVGCGVANKFGVYSNMYELTDWV 271
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 63.7 bits (148), Expect = 2e-10
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = -3
Query: 269 GRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKM 99
G DTCQGD G PL C ++++ L G+ +WG GC D P +YA + ++ WV M
Sbjct: 395 GIDTCQGDSGGPLVCE-NNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWVFHHM 450
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 308 RLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYA 138
RLH+S VCAG G D+CQGD G P+ C + ++ L G+V+WGIGC + VYA
Sbjct: 34 RLHESMVCAGRASGGIDSCQGDSGGPMVCEY-NGKFNLEGVVSWGIGCARPGKYGVYA 90
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEG-RDTCQGDGGAPLACPIGD 213
L + + +V + CN L GT +H++ +CAG + G +D+C+ D G PLAC G
Sbjct: 180 LNFVMVPLVSHATCNKPLSYN--GT---IHETALCAGYERGLKDSCEFDSGGPLACQKG- 233
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKM 99
RY GLV+WG C + VY+ +A++ W+ K+
Sbjct: 234 GRYYAVGLVSWGDECARAHKFGVYSRMAKLTPWMVSKI 271
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 308 RLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANV 132
++ +CAG EG DTCQGD G PL C G +++ L G+ +WG GC VYA V
Sbjct: 794 KISADMICAGNPEGGVDTCQGDSGGPLVCQHG-NQWFLTGVTSWGHGCAFAGKYGVYAGV 852
Query: 131 ARMRSWV 111
+++ WV
Sbjct: 853 QQLKQWV 859
Score = 34.7 bits (76), Expect = 0.094
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 595 NNHTRRFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
+NH + K ND+ALLR+ P L IN+ C+P
Sbjct: 708 HNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMP 744
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = -3
Query: 311 FRLHDSFVCAG-GQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYAN 135
+++ CAG G G D CQGD G PL C GD Y L G ++WG+GC + VYA+
Sbjct: 274 YKVSSRMRCAGYGAGGIDACQGDSGGPLVCKEGDVWY-LMGAISWGVGCARGGRYGVYAD 332
Query: 134 VARMRSWV 111
+ ++ WV
Sbjct: 333 MMDLKYWV 340
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = -3
Query: 308 RLHDSFVCAGGQEGR-DTCQGDGGAPLAC--PIGDSRYKLAGLVAWGIGCGQKDVPAVYA 138
R+ ++ +CAG ++G D+CQGD G P C P ++ L G+ +WG GC + +YA
Sbjct: 388 RITENMLCAGMRQGGVDSCQGDSGGPFVCTNPENPRQWTLVGVTSWGKGCARALKYGIYA 447
Query: 137 NVARMRSWVD 108
NV R W++
Sbjct: 448 NVRRYLHWIN 457
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 58.0 bits (134), Expect = 9e-09
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = -3
Query: 269 GRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMNA 93
G D+CQGD G P+ C + R+ L G+V+WG GC + VYA V ++ W++ +NA
Sbjct: 273 GIDSCQGDSGGPMVCE-NNGRFYLDGVVSWGHGCAGRGKFGVYAKVRYVKEWIESYINA 330
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGD 213
L++ ++ +VP +CNS ++ G + +CAG + G D CQ D G PLAC
Sbjct: 131 LREAQVQLVPQDKCNS--PQSYNG---EVSGRALCAGFERGGVDACQYDSGGPLACE-ER 184
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVD 108
R+ L G+V++G CG +YA++A + +WV+
Sbjct: 185 GRWYLTGVVSYGHECGNPHKYGLYADMATLNTWVE 219
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 290 VCAGGQEG-RDTCQGDGGAPLACPIGDSRYKLAGLVAWGIG-CGQKDVPAVYANVARMRS 117
+CAG + +C GD G P C D RY L G V+WG G C K + V+ VA R+
Sbjct: 2 LCAGVENSILSSCHGDSGGPYVCVQPDGRYVLQGDVSWGSGKCDAKQMFTVFGRVAHFRN 61
Query: 116 WVDRKM 99
W+D M
Sbjct: 62 WIDHHM 67
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCN-----SLLQRTRLGTRFRLHDSFVCAG--GQEGRDTCQGDGGAPL 231
L++ ++ +V N C+ S R GT +R+ ++ +CAG G+ G++ C GD G P
Sbjct: 174 LQQADLRVVSNRACSERHMGSKNMRLENGT-WRVTETMLCAGDAGKTGKNGCNGDSGGPF 232
Query: 230 ACPIGDSRYKLAGLVAWG-IGCGQKDVPAVYANVARMRSWVDR 105
C ++ L G+V+WG C + +V+A V+ +R W+D+
Sbjct: 233 VCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWIDK 275
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 55.2 bits (127), Expect = 6e-08
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = -3
Query: 419 LVSRADTR**LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEGR-DTCQGDG 243
L S DT L++ + +V RC+ ++ S +CAG +G D CQ D
Sbjct: 247 LASGGDTPDLLQQASVPIVSRSRCDKAYPG-------KIDSSMLCAGLDKGGIDACQRDS 299
Query: 242 GAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKM 99
G PL G+ R+ + G +WG GC + VYA+V + WV M
Sbjct: 300 GGPLVSKTGE-RFYIHGATSWGYGCARSGKFGVYAHVKNLIGWVTSGM 346
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = -3
Query: 287 CAG-GQEGRDTCQGDGGAPLACPI---GDSRYKLAGLVAWGIGCGQKDVPAVYANVARMR 120
CAG G+ G DTC GD G G R+ AG+V+WG GCGQKD Y V
Sbjct: 276 CAGDGKGGNDTCHGDSGGSFVREFRREGKYRWVSAGIVSWGEGCGQKDKYGFYTRVEPYV 335
Query: 119 SWV 111
W+
Sbjct: 336 HWI 338
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 52.0 bits (119), Expect = 6e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -3
Query: 287 CAGGQEG-RDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANV--ARMRS 117
CAG G RD C+GD G+P+ D + GL +WG GC QK VYA++ A
Sbjct: 902 CAGDVMGERDACKGDSGSPIVVKRTDGSWSAVGLSSWGEGCAQKGKFGVYADLLSAEYDL 961
Query: 116 WVDR 105
W+ R
Sbjct: 962 WITR 965
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 574 NTKSLKNDVALLRMHAPFNLAEHINMICLPXP 479
N L DVAL+++ L ++ +CLP P
Sbjct: 808 NKNGLDFDVALIQLKGGVKLTAYVRTVCLPQP 839
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 52.0 bits (119), Expect = 6e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = -3
Query: 287 CAG-GQEGRDTCQGDGGAPLACPI---GDSRYKLAGLVAWGIGCGQKDVPAVYANVARMR 120
CAG G+ G DTC+GD G + G R+ AG+V+WG GCG K Y V
Sbjct: 218 CAGEGKGGNDTCRGDSGGSFVREVRREGKYRWVSAGIVSWGEGCGIKGKYGFYTRVESYL 277
Query: 119 SWVD 108
SW++
Sbjct: 278 SWIN 281
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHD-SFVCAGGQEGRDTCQGDGGAPLACPIGD 213
L++ E+ + N +C+ + G + D S VCAGG GR CQGD G PL C
Sbjct: 547 LQEAELVVASNAKCDK-----KNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCNEA- 599
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVD 108
R+ L G+V+WG + V+ V W++
Sbjct: 600 GRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWIE 634
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHD-SFVCAGGQEGRDTCQGDGGAPLACPIGD 213
L++ E+ + N +C+ + G + D S VCAGG GR CQGD G PL C
Sbjct: 87 LQEAELVVASNAKCDK-----KNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCNEA- 139
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVD 108
R+ L G+V+WG + V+ V W++
Sbjct: 140 GRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWIE 174
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
FN + +ND+ALL + P H++ +CLP
Sbjct: 26 FNERHYRNDIALLELERPVLTNPHVSPVCLP 56
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/67 (38%), Positives = 34/67 (50%)
Frame = -3
Query: 296 SFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRS 117
S +CAGG G CQGD G P C G R+ L G V+WG D V+A V+
Sbjct: 242 SMICAGGM-GMGGCQGDSGGPFVCNEG-GRWVLRGAVSWGQPMCGTDHYTVFARVSSFID 299
Query: 116 WVDRKMN 96
W++ M+
Sbjct: 300 WINDMMS 306
Score = 36.3 bits (80), Expect = 0.031
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
F+ LKNDVALL++ P ++ +N +CLP
Sbjct: 155 FSMSHLKNDVALLKLDNPIQPSDKVNTVCLP 185
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQE-GRDTCQGDGGAPLACPIGD 213
L+++ + +V + +C++ T L ++ CAG + + C GD G PL C G
Sbjct: 439 LQEVGLPLVNHSQCHA----TYLTASRKITPRMRCAGTEGVAKAVCSGDSGGPLVCERG- 493
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMNAWG 87
R+ L GL +WG C Q P V+++V W+ K +G
Sbjct: 494 GRWFLMGLSSWGWVCPQAR-PKVFSDVLAAMDWIREKTRYYG 534
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
++ ++ D ALL++ P N +++ +CLP
Sbjct: 380 YSYNTVDYDYALLKLTRPLNFTQYVQPVCLP 410
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQE-GRDTCQGDGGAPLACPIGD 213
L+++ + +V + +C++ T L ++ CAG + + C GD G PL C G
Sbjct: 688 LQEVGLPLVNHSQCHA----TYLTASRKITPRMRCAGTEGVAKAVCSGDSGGPLVCERG- 742
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMNAWG 87
R+ L GL +WG C Q P V+++V W+ K +G
Sbjct: 743 GRWFLMGLSSWGWVCPQAR-PKVFSDVLAAMDWIREKTRYYG 783
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
++ ++ D ALL++ P N +++ +CLP
Sbjct: 629 YSYNTVDYDYALLKLTRPLNFTQYVQPVCLP 659
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 48.0 bits (109), Expect = 9e-06
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -3
Query: 296 SFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVA 129
S +CAGGQ CQGD G P C G ++ L G V+WG + D V+A A
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEG-GKWVLRGAVSWGHEMCRTDYYTVFAREA 189
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Frame = -3
Query: 287 CAGGQEGR--DTCQGDGGAPL-------ACPIGDSRYKLAGLVAWGIGCGQKDVPAVYAN 135
CAG + D CQGD G P A P G R+ L G+++WG GCG+ VY
Sbjct: 294 CAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGVYTR 353
Query: 134 VARMRSWV 111
+ W+
Sbjct: 354 LFNFIDWI 361
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
++ S +D+AL+R+ P +++ ICLP
Sbjct: 202 YSPDSYDSDIALIRLAQPVTFTDYVKPICLP 232
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 46.0 bits (104), Expect = 4e-05
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Frame = -3
Query: 431 GRTSLVSRADTR**LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAG-GQEGRDTC 255
G S+ + AD LK+ + +V + CN Q + + + CAG G+D C
Sbjct: 252 GDVSVKNLADA---LKETCMPIVNSHVCNQAFQ----DEGYSVTPNMFCAGQASGGKDIC 304
Query: 254 QGD-GGAPLACPIGDSRYKLAGLVAWG--IGCGQKDVPAVYANVARMRSWV 111
QGD GG + ++ L G+V+WG +GCG + VY V + W+
Sbjct: 305 QGDSGGGFVLYDSAKQKWFLGGVVSWGSSLGCGLPNKYGVYVRVTQFLGWI 355
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 266 RDTCQGDGGAPLACPIGDSRYKLAGLVAWGI-GCGQKDVPAVYANVARMRSWVDRKMNA 93
+ TC+GD G PL C R+ L G+ +W GC VYA+V + W+ + +++
Sbjct: 1967 KGTCKGDSGGPLVCE-SKGRWVLMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQTVSS 2024
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = -3
Query: 296 SFVCAGGQEGRDT---CQGDGGAPLACPIGD--SRYKLAGLVAWGIG-CGQKDVPAVYAN 135
S +CAG + + C GD G PL C GD S++ L G+ +WG C + +V+
Sbjct: 287 SMLCAGYNDNKTQTSGCIGDSGGPLMCKAGDRWSKWVLHGVTSWGDSTCDGRAAYSVFTK 346
Query: 134 VARMRSWVDRKMNA 93
V+ W+ R M A
Sbjct: 347 VSNFVQWIYRTMAA 360
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 296 SFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGI--GCGQKDVPAVYANVARM 123
+ +CAGG G C GD G PL C G + + L G V+WG C + A YA ++
Sbjct: 482 TMICAGGS-GSSACSGDSGGPLVCHEGGT-WVLRGAVSWGTSHSCPGRMFVA-YARISSH 538
Query: 122 RSWVDR 105
W++R
Sbjct: 539 IDWIER 544
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 589 HTRRFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
H + K K+D+AL+R+ P + ++ +CLP
Sbjct: 390 HEKYVGGKDKKHDLALIRLAKPAAFSAKVSPVCLP 424
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -3
Query: 299 DSFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIG-CGQKDVPAVYANVARM 123
+S +CAGG G C GD G PL C + + R+ L G+ +W + +VYA V+
Sbjct: 456 NSMICAGGA-GSSACNGDSGGPLQC-LENERWVLRGVASWVTAETCPGNTFSVYARVSSY 513
Query: 122 RSWVD 108
+W++
Sbjct: 514 SNWIE 518
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
F+ ++NDVALL++ L++ + ICLP
Sbjct: 319 FSMVHVRNDVALLKLSTYVQLSDKVGTICLP 349
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -3
Query: 299 DSFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVP--AVYANVAR 126
++ +C GG G C GD G PL C G ++ L G+ +W + Q V +VYA V+
Sbjct: 107 ETMMCVGGA-GSSACNGDSGGPLVCEEG-GKWVLRGVASW-VATSQCPVNNYSVYARVSS 163
Query: 125 MRSWVDRKMNA 93
W+ K+ A
Sbjct: 164 DVDWIQDKIAA 174
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 568 KSLKNDVALLRMHAPFNLAEHINMICLP 485
K L++D+ALLR+ P + + ++ CLP
Sbjct: 24 KRLRHDIALLRLARPLAVDKKVSTACLP 51
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = -3
Query: 290 VCAGGQEGRDT--CQGDGGAPLACPIGDSRYKLAGLVAWG---IGCGQKDVPAVYANVAR 126
+C G G C GD G P C + R+ + G+V+WG GQ + VYA VA+
Sbjct: 1502 ICGGFGAGSTISGCFGDSGGPFVCQGSNKRWNIQGVVSWGTRTCSSGQNEY-TVYARVAQ 1560
Query: 125 MRSWV 111
W+
Sbjct: 1561 FVPWI 1565
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
+ ++ +DVALLR+ P L + +++ICLP
Sbjct: 1414 YRRQTTDSDVALLRLSHPATLNKAVSLICLP 1444
Score = 28.7 bits (61), Expect = 6.1
Identities = 33/134 (24%), Positives = 47/134 (35%), Gaps = 9/134 (6%)
Frame = -2
Query: 678 PXQXEARAGEWTPRPSXNADHQVR---------LVEEIIIHEDSTRKALRTTWRSCGCXX 526
P R G TPRPS +H +R V ++I+H + R+ +
Sbjct: 1373 PRPPTPRPGPPTPRPS--GEHNLRRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSH 1430
Query: 525 XXXXXXXXXXXXXXXPGDSFDTSKNCVANGWGKDVFGLQGRYAVITEENRNRYGAEPSLQ 346
G+S KNC GWG+ + G A + +E S Q
Sbjct: 1431 PATLNKAVSLICLPKEGESEAVGKNCYITGWGRTGYNRPG--ASVLQEAMMPI---VSQQ 1485
Query: 345 FAAAANQTWDQVPS 304
AAA + W V S
Sbjct: 1486 TCAAAMRRWGVVTS 1499
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 41.1 bits (92), Expect = 0.001
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -1
Query: 580 RFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
+F+ + LKND+ALL++H P ++ +N +CLP
Sbjct: 112 QFSMRHLKNDIALLQLHEPVKASDKVNTVCLP 143
Score = 37.1 bits (82), Expect = 0.018
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -3
Query: 296 SFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWG 177
S +CAGGQ G+ CQGD G P C G LV G
Sbjct: 200 SMICAGGQ-GKGGCQGDSGGPFVCEEGGKWVLRGALVRIG 238
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 296 SFVCAG--GQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARM 123
S +C G + +CQGD G PL C + R+ L G ++G C K +VY V
Sbjct: 489 SHICVGFNTENAASSCQGDSGGPLVCE-EEGRWVLHGATSFGKSCSPKHY-SVYTRVNSY 546
Query: 122 RSWV 111
W+
Sbjct: 547 MKWI 550
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 290 VCAG-GQEGRDT-CQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRS 117
+CAG + G C GD G PL C + R+ L G V++G V+A VA
Sbjct: 249 LCAGEARSGASGGCNGDSGGPLVCE-DNGRWYLHGAVSYGKLHCPTTYYTVFARVASYTD 307
Query: 116 WV 111
W+
Sbjct: 308 WI 309
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 290 VCAGGQE--GRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRS 117
+CAG + CQGD G PL C + ++ L G+V++G G + VY V+
Sbjct: 114 LCAGEAKPNAAGACQGDSGGPLVCE-RNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLD 172
Query: 116 WVDRK 102
W+ ++
Sbjct: 173 WITKR 177
Score = 32.7 bits (71), Expect = 0.38
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLPXP 479
F+ ++D+ALL++ P L + +N+ CLP P
Sbjct: 26 FSMWRYRDDIALLQLERPAQLNDRVNVACLPSP 58
>SB_24599| Best HMM Match : Complex1_24kDa (HMM E-Value=0)
Length = 487
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = -2
Query: 279 GTGGQGHLPGRRWSPPGLSHR*QPLQVGRAGRLGHRVRAEGRARGLRQRG 130
G GQ +PG+R P GL R QP G+ R R EG A+G R+ G
Sbjct: 250 GKRGQPKVPGKRRQPKGLGKRGQPKDSGKR-RAAQGFRKEGAAQGSREEG 298
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 37.9 bits (84), Expect = 0.010
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHD-SFVCAGGQEGRDTCQGDGGAPLACPIGD 213
L++ + ++ N +C + + +++ D S VCAGG G C GD G PL C +
Sbjct: 105 LQQSRVSIIENNKC-----KVKNDCHYKVLDKSMVCAGGA-GSSICHGDSGGPLQCE-EN 157
Query: 212 SRYKLAGLVAWGIGCGQKDVPAVYANV-ARMR 120
+ L G+ +W + P Y +V AR+R
Sbjct: 158 GHWVLRGVASW---VARMHCPGEYYSVYARVR 186
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
F+ + +D+A+LR+ AP L +N ICLP
Sbjct: 43 FSFATADHDIAILRLSAPVLLTSSVNTICLP 73
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 583 RRFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
+ F+ L+NDV LLR+ AP L++ I ICLP
Sbjct: 164 KEFSMGHLRNDVTLLRLSAPVQLSDKIGTICLP 196
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 37.1 bits (82), Expect = 0.018
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -1
Query: 589 HTRRFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
H + F ++ ND+AL++++ P L +++N+ CLP
Sbjct: 433 HPQYFEPTAINNDIALIKLNKPARLNKYVNLACLP 467
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Frame = -3
Query: 344 SLLQRTRLGTRFRLHDS--FVCAGGQEGRDTCQGDGGAPLACPIGDS------RYKLAGL 189
+L+ R R R +D +CAG TC D G+PL P+ + R+ L G+
Sbjct: 821 TLVHRHRCSWALRNYDGNRLLCAGFLTSDVTCISDSGSPLMFPVPHAQNPNVKRWILGGI 880
Query: 188 VAWGI-----GCGQKDVPAVYANVARMRSWV 111
++WG+ GC + Y ++ W+
Sbjct: 881 LSWGLNTLTPGCHSDYSHSAYVDIGSYLKWI 911
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.5 bits (78), Expect = 0.054
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 580 RFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
++N L ND+AL+ + +P L+ +N +CLP
Sbjct: 557 QYNNPRLSNDIALIELASPAKLSSRVNPVCLP 588
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 35.5 bits (78), Expect = 0.054
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAG--GQEGRDTCQGDGGAPLACPIG 216
L++ I +V + C + + R + + +CAG G C GD G P C G
Sbjct: 430 LQQARIPVVSSEECERVNNKHRKVDKVTM----LCAGNGGNSSISGCHGDSGGPFVCMGG 485
Query: 215 DSRYKLAGLVAWGIGCGQKDV 153
D R+ L G V + + +V
Sbjct: 486 DGRWVLRGAVRMTVSLAKVNV 506
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.1 bits (77), Expect = 0.071
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 290 VCAGG--QEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRS 117
+CAG + C GD G PL C S + L G V++G+ V+A VA
Sbjct: 604 LCAGEARSDAAGGCNGDSGGPLVCEDNGSWF-LHGAVSYGLRNCPTTHYTVFARVASYTD 662
Query: 116 WVDR 105
W+ R
Sbjct: 663 WIKR 666
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 257 CQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDR 105
C GD G PL C S + L G V++G+ V+A VA W+ R
Sbjct: 283 CNGDSGGPLVCEDNGSWF-LHGAVSYGLRNCPTTHYTVFARVASYTDWIKR 332
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 35.1 bits (77), Expect = 0.071
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 290 VCAGG--QEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRS 117
+CAG + C GD G PL C S + L G V++G+ V+A VA
Sbjct: 934 LCAGEARSDAAGGCNGDSGGPLVCEDNGSWF-LHGAVSYGMKYCPTTHYTVFARVASYTD 992
Query: 116 WVDR 105
W+ R
Sbjct: 993 WIKR 996
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -3
Query: 257 CQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMN 96
C GD G PL C + L G V++G D V+ V+ +W++ K++
Sbjct: 674 CNGDSGGPLVCE-QSGVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWINGKID 726
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 571 TKSLKNDVALLRMHAPFNLAEHINMICLP 485
T +L NDVAL+++ P L +N CLP
Sbjct: 589 TTNLLNDVALIQLARPVTLGSKVNTACLP 617
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 314 RFRLHDSFVCAGGQEGR-DTCQGDGGAPL 231
R ++H+S +CAG G D CQGD G P+
Sbjct: 486 RGQIHESMLCAGLDAGGVDACQGDSGGPM 514
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 589 HTRRFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
H R N +L ND+A++ + P L +N+ CLP
Sbjct: 103 HERYSNPVNLANDIAVIELEEPARLNRAVNLACLP 137
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 308 RLHDSFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAG 192
R+ +CAG G D C GDGG+PL C + +AG
Sbjct: 1400 RVTAQMLCAGPAAGESDNCFGDGGSPLMCQGASREWFVAG 1439
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 389 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEGR-DTCQGDGGAPL 231
L++ ++ +VP CN L + GT +H +CAG +EG D CQ D G PL
Sbjct: 101 LREAKVRLVPTWVCN--LVNSYNGT---IHSRALCAGFKEGGVDACQYDSGGPL 149
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -3
Query: 320 GTRFRLHDSFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVY 141
G + +++ + +C+ G C DGG+PL + L G+ +WG C AVY
Sbjct: 207 GYKGQVYANMICSDGL----ACSVDGGSPLVAN-DSNMLMLLGVFSWGRSCALDMKQAVY 261
Query: 140 ANVAR-MRSWVDR 105
++ + +W+++
Sbjct: 262 TSITHGILAWLNK 274
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 32.7 bits (71), Expect = 0.38
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1
Query: 580 RFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
RF+ ++ +D+AL+R+ N+ E++ +CLP
Sbjct: 1252 RFSWRTYDSDIALIRLRWKANITEYVRPVCLP 1283
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 31.9 bits (69), Expect = 0.66
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -1
Query: 577 FNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
++ L++D+AL+++ +P L+ +N +CLP
Sbjct: 1567 YSRSHLRHDIALIKLASPAKLSATVNTVCLP 1597
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -3
Query: 299 DSFVCAG--GQEGRDTCQGDGGAPLACPIGDSRYKLAGLV 186
DS VCAG G C GD G P C D R+ L G++
Sbjct: 224 DSMVCAGDAGITKTSGCYGDSGGPFVCKTAD-RWVLQGVL 262
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 556 NDVALLRMHAPFNLAEHINMICLP 485
NDVALL++ P + +N +CLP
Sbjct: 151 NDVALLQLSRPAFVTSFVNTVCLP 174
>SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 187 TSPANL*RLSPMGQARGAPPSPWQVSLPSCP--PAHTKLSCRRNLVPSLVRCSSELQR 354
T+P N ++ Q+ P +P +VS+ SCP P R++ P V CSS L R
Sbjct: 227 TTPGN--HVTSPDQSVSCPTTPQEVSIRSCPTTPVEVSPDASRDMAP--VTCSSLLSR 280
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 589 HTRRFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
H R K D+ALL++ P + E + +CLP
Sbjct: 126 HQRFLTDKGYGYDIALLKLSRPAVINEFVRTVCLP 160
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/78 (30%), Positives = 32/78 (41%)
Frame = -2
Query: 390 TEENRNRYGAEPSLQFAAAANQTWDQVPSARQFRVRRGTGGQGHLPGRRWSPPGLSHR*Q 211
T+ NR +G S Q AA + + Q R GT H P R + G+ + Q
Sbjct: 294 TKANRRLFGIPGSRQCPVAALKLYIQK------RNDEGTEAFFHTPNRHFKETGVWYTPQ 347
Query: 210 PLQVGRAGRLGHRVRAEG 157
P GRL + AEG
Sbjct: 348 PTGKNTLGRLMKDIAAEG 365
>SB_49278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 117 RPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHET 296
RP + V V R L P+ P Q + +G GGS+ ++AS ++S +
Sbjct: 419 RPRSSSVPVARQMGLSPSAVIPPPARSQSLVNGAM-SGSGGSSSSIASSDQMVSSPTRHS 477
Query: 297 VVQTEPGPKSGS 332
V T P +S S
Sbjct: 478 PVSTSPSRRSPS 489
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 589 HTRRFNTKSLKNDVALLRMHAPFNLAEHINMICLP 485
H + K K+D+AL+++ P + ++ +CLP
Sbjct: 106 HEKYVGGKDKKHDLALIKLAKPATFSTKVSPVCLP 140
>SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 180 PGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVVQTEPGPKSGS 332
PG P L+ T GG V A++ P + T VQ P+SGS
Sbjct: 706 PGTTPTLLI---TQAPASGGGFVVNGIAQAVVLPSSTATTVQVSLSPRSGS 753
>SB_961| Best HMM Match : CUB (HMM E-Value=3.4e-08)
Length = 490
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +3
Query: 192 PGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVVQTEPGPKSGSLQQRIAARVRHHI 371
P + + T + GS+ A P E T P +G+L + RVRH
Sbjct: 234 PIEPTSMTTVTSSSNGSSTASLKTTEHSKPTDPELPTTTAPHKSTGTLIPSVGGRVRHSN 293
Query: 372 DF 377
DF
Sbjct: 294 DF 295
>SB_726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 114 PRPHAGHVGVDRGHVLLPAPDAPGDQP 194
P+P AGH+ + + H LL P+ D P
Sbjct: 115 PKPPAGHLSMSKPHTLLLLPNINYDAP 141
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,152,243
Number of Sequences: 59808
Number of extensions: 519765
Number of successful extensions: 1808
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -