Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D02
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1114 + 30995816-30996229,30997054-30997129,30997493-309975...    40   0.002

>04_04_1114 +
           30995816-30996229,30997054-30997129,30997493-30997587,
           30997729-30997812,30998094-30998181,30998485-30998609,
           30998687-30998785,31000089-31000190,31001570-31001680
          Length = 397

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMH 508
           RGT FG  T   R ESIL+SLPL A+W+Y H
Sbjct: 298 RGTTFGLKTG-GRIESILVSLPLTARWQYDH 327


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,045,432
Number of Sequences: 37544
Number of extensions: 259161
Number of successful extensions: 349
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)