Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D02
         (828 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34531-1|CAA84292.1|  454|Homo sapiens coproporphyrinogen oxidas...    56   2e-07
Z28409-1|CAA82250.1|  354|Homo sapiens coproporphyrinogen oxidas...    56   2e-07
D16611-1|BAA04033.1|  354|Homo sapiens coproporphyrinogen oxidas...    56   2e-07
BC023554-1|AAH23554.1|  454|Homo sapiens coproporphyrinogen oxid...    56   2e-07
BC023551-1|AAH23551.1|  454|Homo sapiens coproporphyrinogen oxid...    56   2e-07
BC017210-1|AAH17210.1|  454|Homo sapiens coproporphyrinogen oxid...    56   2e-07
AK223481-1|BAD97201.1|  454|Homo sapiens coproporphyrinogen oxid...    56   2e-07

>Z34531-1|CAA84292.1|  454|Homo sapiens coproporphyrinogen oxidase
           protein.
          Length = 454

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMHQVQPNS 490
           RGTKFG  T  +R ESILMSLPL A+WEYMH    NS
Sbjct: 401 RGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 437


>Z28409-1|CAA82250.1|  354|Homo sapiens coproporphyrinogen oxidase
           protein.
          Length = 354

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMHQVQPNS 490
           RGTKFG  T  +R ESILMSLPL A+WEYMH    NS
Sbjct: 301 RGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 337


>D16611-1|BAA04033.1|  354|Homo sapiens coproporphyrinogen oxidase
           protein.
          Length = 354

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMHQVQPNS 490
           RGTKFG  T  +R ESILMSLPL A+WEYMH    NS
Sbjct: 301 RGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 337


>BC023554-1|AAH23554.1|  454|Homo sapiens coproporphyrinogen oxidase
           protein.
          Length = 454

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMHQVQPNS 490
           RGTKFG  T  +R ESILMSLPL A+WEYMH    NS
Sbjct: 401 RGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 437


>BC023551-1|AAH23551.1|  454|Homo sapiens coproporphyrinogen oxidase
           protein.
          Length = 454

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMHQVQPNS 490
           RGTKFG  T  +R ESILMSLPL A+WEYMH    NS
Sbjct: 401 RGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 437


>BC017210-1|AAH17210.1|  454|Homo sapiens coproporphyrinogen oxidase
           protein.
          Length = 454

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMHQVQPNS 490
           RGTKFG  T  +R ESILMSLPL A+WEYMH    NS
Sbjct: 401 RGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 437


>AK223481-1|BAD97201.1|  454|Homo sapiens coproporphyrinogen oxidase
           variant protein.
          Length = 454

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = -1

Query: 600 RGTKFGXHTXEARYESILMSLPLNAKWEYMHQVQPNS 490
           RGTKFG  T  +R ESILMSLPL A+WEYMH    NS
Sbjct: 401 RGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 437


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,737,544
Number of Sequences: 237096
Number of extensions: 1650041
Number of successful extensions: 6104
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6104
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)