Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D02
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL009246-2|CAA15836.3|  362|Caenorhabditis elegans Hypothetical ...    31   1.0  
Z48055-8|CAA88133.2|  379|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AL022274-2|CAA18358.1|  329|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z73976-1|CAA98289.1|  324|Caenorhabditis elegans Hypothetical pr...    28   9.4  
Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>AL009246-2|CAA15836.3|  362|Caenorhabditis elegans Hypothetical
           protein C47F8.2 protein.
          Length = 362

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +2

Query: 242 FREYYKSVKGLCVATLKMPTWSEV*FKQYCIFQICLASSLLDFKIDTDIYNNTICS 409
           F  + KS  G C+A LK+  +    FK +C++ I    +    K+    +   + S
Sbjct: 250 FISHIKSTLGACLANLKLDVYEFAAFKSFCVWSIGAQGATESMKVVAQEHYEAVAS 305


>Z48055-8|CAA88133.2|  379|Caenorhabditis elegans Hypothetical
           protein T07A5.1 protein.
          Length = 379

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = -1

Query: 240 IKVYYFGGLYRFIKLVINIS*LYKNNRYLRMFI*MDS*IFASWLRDKIRNLESCQNQIFS 61
           ++VY F G++ FI L+I I   ++  ++  + + +DS    S  ++ + NL+S    +  
Sbjct: 5   LRVYIFAGIFLFIALIILIKIFFEEEKFDVLVVSLDSKEKTS--KECLSNLQSVSIPV-P 61

Query: 60  VLAVNKLVL 34
            L ++K VL
Sbjct: 62  ALIIDKTVL 70


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -2

Query: 674  GXPRGSNGXXSXXGXYVEFXSHIRPEEQSLGCTLXKLDTNQY*CRF 537
            G   GS+G  S     + F S  R  +  L C    + TN+  CRF
Sbjct: 4633 GHTEGSSGLVSLCSSLMSFRSKYRVAQLHLKCPTNSIKTNKMICRF 4678


>AL022274-2|CAA18358.1|  329|Caenorhabditis elegans Hypothetical
           protein H24D24.2 protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 318 LSSIVYSKYVLHLLC*TSKSILIFTIILFALCIRPL-FILYLKPIFXVLLGFSTVFLLQS 494
           +++I  S  + HL+  T KS+ ++TI LF + I    F   L  +F  L  + T++ + S
Sbjct: 43  IATIGVSINIFHLIVLTRKSLRVYTINLFMIGIAICDFTRLLSDVFSTLPDYYTIYQVSS 102


>Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical
           protein C29F4.2 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 101 KLETWNHVKIKYFLYWL*INWFF 33
           +L+ +N V+ +Y  YWL  NW F
Sbjct: 167 ELKKYNEVESRYAKYWLGFNWTF 189


>Z73976-1|CAA98289.1|  324|Caenorhabditis elegans Hypothetical
           protein T07C12.1 protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +3

Query: 306 RKCNLSSIVYSKYVLHLLC*TSKSILIFTIILFALCIRPLFILYLKPIFXVLLG 467
           RK N +S   S     L     KS++I TII   +   P  + +  PIF + LG
Sbjct: 222 RKLNENSFRMSASTTKLQKALLKSLIIQTIIPICVSYAPCVLCWYSPIFNINLG 275


>Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical
           protein C12D8.12 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 372 KSILIFTIILFALCIRPLFILYLKPIFXVLLGFS 473
           ++++  T+I   +   PLFIL+L P+  + LGF+
Sbjct: 248 RALVFQTLIPLIIMYIPLFILFLFPMLNIDLGFA 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,801,403
Number of Sequences: 27780
Number of extensions: 265885
Number of successful extensions: 549
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)