Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C24
(830 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21) 31 1.5
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 31 1.5
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 30 2.0
SB_40452| Best HMM Match : Upf2 (HMM E-Value=4.3) 30 2.6
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 30 2.6
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 30 2.6
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_48139| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 29 4.6
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10) 29 4.6
SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16) 29 4.6
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 29 6.1
SB_42866| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_43687| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_46683| Best HMM Match : F5_F8_type_C (HMM E-Value=9.6e-12) 28 8.1
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 28 8.1
>SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 66.9 bits (156), Expect = 2e-11
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Frame = -2
Query: 499 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTK----QRSTSKLRKDMEKLGVDMSE- 335
A +IR K+ ++ + R K + +P++PR + AK + +RS + D +K+ +D +
Sbjct: 401 AAEIREKRKLIVKQHRESKGTNRPIIPRKALAKAETARNKRSAGVIDSD-KKMDIDEDQD 459
Query: 334 ---TGDAHFTXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIA 179
TG R S P +++P + K K +A +
Sbjct: 460 EPMTGRKRSRSQTPANAKRRRSNTASVTPRSQSRVPRDQSGLSNPEKKQKAKTLAKT-VQ 518
Query: 178 KKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
+K +MG GEADR I TKMPKHLF+GKR GKT RR
Sbjct: 519 RKMNRMGKAGEADRMIRTKMPKHLFSGKRKGGKTSRR 555
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = -1
Query: 752 DIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 573
D+E ELG+ Y ++ + ++E+ DVIPEI+ G NIADYIDPDI
Sbjct: 316 DVERELGEDYYLDLRQQWDLKNKEEKGDVIPEIFLGKNIADYIDPDIMKKLEELEKEEEL 375
Query: 572 XXAGGMYAAPKIELDDTVRE 513
A G+Y + E D+ E
Sbjct: 376 REAAGVYESESEEELDSEGE 395
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 559 ACTPRPRSSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTK 395
A R S T P + ++ ARQ R K + +D+ + KQ+ +P R + KTK
Sbjct: 388 AARTRQDSCETEPQEQDKKAARQARRKTSTPQDQDKQDKQAARPRQARQASRKTK 442
>SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21)
Length = 1329
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -2
Query: 532 WTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
W + ELAR+ RN K L E L+ +S + V+PR+ RA+
Sbjct: 909 WPEDKDQVDELAREYRNYKEELSVEDGLLFKSDRIVVPRSMRAE 952
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -2
Query: 538 SSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
+ W + G+ ELAR+ N + L E L+ +S + V+PR RAK
Sbjct: 839 TGWPSDRGQIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAK 884
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 63 HYLRSVLPTPRFPANRCFGILVPMNRSASPLRPIFLVF--LAMAACAILFTFTRMMGSAT 236
HYLR+ P P A F ++ P S +R + F A+ A AIL T ++ S
Sbjct: 694 HYLRAGFPLPALLALAIFIVMTPGKSSGRVIRILRAGFPLPALLALAILIVMTPVIDSVP 753
Query: 237 GWL 245
G L
Sbjct: 754 GLL 756
>SB_40452| Best HMM Match : Upf2 (HMM E-Value=4.3)
Length = 245
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -2
Query: 532 WTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
WT + ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 83 WTEDKDQVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -2
Query: 502 LARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGD 326
L R++RN + L D + KQS+ + T +T + S L D++K G+
Sbjct: 319 LQRELRNVREKLMDVENVHKQSSNALESATGEMQTARDKLSLLEFDLQKANKQKQSVGE 377
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -2
Query: 502 LARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGD 326
L R++RN + L D + KQS+ + T +T + S L D++K G+
Sbjct: 2847 LQRELRNVREKLMDVENVHKQSSNALESATGEMQTARDKLSLLEFDLQKANKQKQSVGE 2905
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 538 SSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
+ W + G+ ELAR+ N + L E L+ +S + V+PR RA+
Sbjct: 786 TGWPSDRGQMDELAREYFNYREELSVEDGLLFKSNRIVVPRGMRAE 831
>SB_48139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 538 SSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
+ W + G+ ELAR+ N + L E L+ +S + V+PR RA+
Sbjct: 137 TGWPSDRGQIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAE 182
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 538 SSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
+ W + G+ ELAR+ N + L E L+ +S + V+PR RA+
Sbjct: 631 TGWPSDRGQIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAE 676
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 538 SSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
+ W + G+ ELAR+ N + L E L+ +S + V+PR RA+
Sbjct: 631 TGWPSDRGQIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAE 676
>SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10)
Length = 1118
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 538 SSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
+ W + G+ ELAR+ N + L E L+ +S + V+PR RA+
Sbjct: 816 TGWPSDRGQIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAE 861
>SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16)
Length = 656
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 538 SSWTTP*GRXRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 401
+ W + G+ ELAR+ N + L E L+ +S + V+PR RA+
Sbjct: 326 TGWPSDRGQIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAE 371
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 469 LKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 338
LK +KQ+ K + +RA+ K TSK K + K +D+S
Sbjct: 227 LKGVLEKIKQARKASKKKRARARKKHNKTSKKSKHVSKKPLDIS 270
>SB_42866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 236 GGRPHHARESKEDGARGHRQEDQEDGPQGRGGPVHRHQDAEASVR 102
GGR +E DG RG ++E EDG GRG D E R
Sbjct: 270 GGRGDK-KEHMADGGRGDKKEHMEDG--GRGDKKEHMADGERGDR 311
>SB_43687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 167 EDGPQGRGGPVHRHQDAEASVRWKTWGRQDGPEIVH 60
ED GG HR +D EAS+ K +DG ++H
Sbjct: 417 EDDDDVNGGDYHRVEDDEASITIKQTNAEDG-HVLH 451
>SB_46683| Best HMM Match : F5_F8_type_C (HMM E-Value=9.6e-12)
Length = 495
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 245 QPAGGRPHHARESKEDGARGHRQEDQEDG--PQGRGGPVHRHQDAEASVR 102
Q AGG ARE ++ G G R + +G P R G H EA R
Sbjct: 264 QDAGGTRARAREEQDTGRGGGRATETTEGTAPHVREGEDEVHTAGEAGFR 313
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TCRQPRAVPRPSPTLPVYQRCPGRYS 631
TC QP A P+P+P P RYS
Sbjct: 488 TCTQPSAKPKPAPRPPSVSLARRRYS 513
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,091,905
Number of Sequences: 59808
Number of extensions: 346244
Number of successful extensions: 1565
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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