Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C24
(830 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 73 1e-12
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 72 2e-12
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 72 2e-12
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 72 2e-12
AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens ... 72 2e-12
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 72 2e-12
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 71 7e-12
AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding prot... 66 1e-10
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 6.8
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 6.8
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 6.8
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 6.8
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 6.8
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 31 6.8
AB212048-1|BAE46980.1| 116|Homo sapiens succinate dehydrogenase... 31 6.8
AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase... 31 6.8
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 6.8
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 31 6.8
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 72.9 bits (171), Expect = 1e-12
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = -2
Query: 508 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 329
R+LA+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM +
Sbjct: 481 RQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKD 535
Query: 328 DAHFTXXXXXXXXXXXXXXXXXXXREPS--------NQP-----VADPIMRVKVKRMAHA 188
DAH+ S P + D M K K M +A
Sbjct: 536 DAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMKNA 595
Query: 187 AIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
KK ++G KGEADR + PKHL +GKR GK DRR
Sbjct: 596 Q--KKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 633
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 395 KKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAI 446
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 72.1 bits (169), Expect = 2e-12
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = -2
Query: 508 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 329
R+LA+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM +
Sbjct: 481 RQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKD 535
Query: 328 DAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHA 188
DAH+ + S P + D M K K M
Sbjct: 536 DAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKN 595
Query: 187 AIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
A KK ++G KGEADR + PKHL +GKR GK DRR
Sbjct: 596 A-QKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 634
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 395 KKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAI 446
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 72.1 bits (169), Expect = 2e-12
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = -2
Query: 508 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 329
R+LA+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM +
Sbjct: 479 RQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKD 533
Query: 328 DAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHA 188
DAH+ + S P + D M K K M
Sbjct: 534 DAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKN 593
Query: 187 AIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
A KK ++G KGEADR + PKHL +GKR GK DRR
Sbjct: 594 A-QKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 632
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 393 KKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAI 444
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 72.1 bits (169), Expect = 2e-12
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = -2
Query: 508 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 329
R+LA+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM +
Sbjct: 481 RQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKD 535
Query: 328 DAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHA 188
DAH+ + S P + D M K K M
Sbjct: 536 DAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKN 595
Query: 187 AIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
A KK ++G KGEADR + PKHL +GKR GK DRR
Sbjct: 596 A-QKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 634
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 395 KKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAI 446
>AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ10690 fis, clone NT2RP3000350, weakly similar to
PROBABLE GTP-BINDING PROTEIN HP0303. ).
Length = 634
Score = 72.1 bits (169), Expect = 2e-12
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = -2
Query: 508 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 329
R+LA+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM +
Sbjct: 481 RQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMHSLGVDMDDKD 535
Query: 328 DAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHA 188
DAH+ + S P + D M K K M
Sbjct: 536 DAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKN 595
Query: 187 AIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
A KK ++G KGEADR + PKHL +GKR GK DRR
Sbjct: 596 A-QKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 634
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 395 KKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAI 446
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 72.1 bits (169), Expect = 2e-12
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = -2
Query: 508 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 329
R+LA+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM +
Sbjct: 481 RQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKD 535
Query: 328 DAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHA 188
DAH+ + S P + D M K K M
Sbjct: 536 DAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKN 595
Query: 187 AIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
A KK ++G KGEADR + PKHL +GKR GK DRR
Sbjct: 596 A-QKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 634
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 395 KKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAI 446
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 70.5 bits (165), Expect = 7e-12
Identities = 58/160 (36%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Frame = -2
Query: 508 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 329
R+LA+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM +
Sbjct: 481 RQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKD 535
Query: 328 DAHFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR----------VKVKRMAHAAI- 182
DAH+ PS+ + R VK+ + A +
Sbjct: 536 DAHYA-VQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKNAKTMMK 594
Query: 181 --AKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 68
KK ++G KGEADR + PKHL +GKR GK DRR
Sbjct: 595 NAQKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 634
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 395 KKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAI 446
>AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding protein
protein.
Length = 562
Score = 66.1 bits (154), Expect = 1e-10
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 767 KGXXEDIEVELGDXYVXXXKKNYXEIPEDERYDVIPEIWEGHNIADYIDPDI 612
K D+E+E+GD Y+ +K + + E+YD IPEIWEGHN+ADYIDP I
Sbjct: 434 KKRERDLELEMGDDYILDLQKYWDLMNSSEKYDKIPEIWEGHNVADYIDPAI 485
Score = 39.5 bits (88), Expect = 0.015
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = -2
Query: 499 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 320
A+QIR KK + +S+ K + P MPRT AK QR+ L +M LGVDM + +AH
Sbjct: 488 AKQIREKKKLKILQSK-EKNTQGPRMPRT--AKKVQRAD--LENEMRSLGVDMDDKDNAH 542
Query: 319 F 317
+
Sbjct: 543 Y 543
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 203 EDGARGHRQEDQEDGPQGRGGP 138
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 203 EDGARGHRQEDQEDGPQGRGGP 138
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 203 EDGARGHRQEDQEDGPQGRGGP 138
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 203 EDGARGHRQEDQEDGPQGRGGP 138
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 203 EDGARGHRQEDQEDGPQGRGGP 138
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 236 GGRPHHARESKEDGARGHRQEDQEDGPQGRGGPV 135
G H RE +E G +G + E DGP GR GP+
Sbjct: 1313 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1345
>AB212048-1|BAE46980.1| 116|Homo sapiens succinate dehydrogenase
complex, subunit C delta3+5 alternative splicing varian
protein.
Length = 116
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 566 PRAVPRPSPTLPVYQRCPGRY 628
PR P SP +PV+ CPG Y
Sbjct: 50 PRKRPEDSPAIPVWSGCPGSY 70
>AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase
complex, subunit C delta5 alternative splicing variant
protein.
Length = 150
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 566 PRAVPRPSPTLPVYQRCPGRY 628
PR P SP +PV+ CPG Y
Sbjct: 84 PRKRPEDSPAIPVWSGCPGSY 104
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 203 EDGARGHRQEDQEDGPQGRGGP 138
E G G R ED +GP+GRGGP
Sbjct: 784 EIGPPGPRGEDGPEGPKGRGGP 805
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 236 GGRPHHARESKEDGARGHRQEDQEDGPQGRGGPV 135
G H RE +E G +G + E DGP GR GP+
Sbjct: 1226 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,022,214
Number of Sequences: 237096
Number of extensions: 1696910
Number of successful extensions: 6623
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6576
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -