Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C23
(824 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 105 1e-23
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 103 3e-23
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 75 2e-14
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 68 2e-12
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 66 6e-12
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 60 3e-10
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 58 1e-09
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 58 2e-09
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 56 5e-09
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 49 9e-07
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 48 2e-06
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 37 0.004
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 28 1.4
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.2
SPCC1235.02 |bio2|SPCC320.01c|biotin synthase|Schizosaccharomyce... 27 4.3
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 27 4.3
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 7.5
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 26 7.5
SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr 1||... 25 9.9
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 105 bits (251), Expect = 1e-23
Identities = 46/89 (51%), Positives = 61/89 (68%)
Frame = -3
Query: 711 T*NXPLTTPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSV 532
T + P P PP ++F T++WHPNV+ NG++CISILHPP DD E ERW P S
Sbjct: 58 TLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSP 117
Query: 531 RTVLLSVISLLNEPNTFSPANVDASVMYR 445
T+L+SVIS+L+ PN SPAN+DA+ +R
Sbjct: 118 ETILISVISMLSSPNDESPANIDAAKEFR 146
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 103 bits (247), Expect = 3e-23
Identities = 50/106 (47%), Positives = 70/106 (66%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVL 520
P P PP+++F + +HPNVY++G +CISILH P DDP E ERW+P QSV +L
Sbjct: 62 PSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKIL 121
Query: 519 LSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQ 382
LSV+S+L EPN S AN+DA M WR+ + +EY ++R+ A+
Sbjct: 122 LSVMSMLAEPNDESGANIDACKM---WREDR---EEYCRVVRRLAR 161
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 74.5 bits (175), Expect = 2e-14
Identities = 39/102 (38%), Positives = 57/102 (55%)
Frame = -3
Query: 687 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 508
P PP ++F++ ++HPNVY NG+LC+ IL RW+PT V +L S+
Sbjct: 64 PNKPPLVKFVSTMFHPNVYANGELCLDILQ-------------NRWSPTYDVAAILTSIQ 110
Query: 507 SLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQ 382
SLLN+PN SPAN +A+ ++R KEY +RK +
Sbjct: 111 SLLNDPNNASPANAEAAQLHRE------NKKEYVRRVRKTVE 146
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 67.7 bits (158), Expect = 2e-12
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVL 520
P PYSPP+I F + +WHPNV +G++C+ IL ++W+ +V+T+L
Sbjct: 85 PANYPYSPPTIIFTSPMWHPNVDMSGNICLDILK-------------DKWSAVYNVQTIL 131
Query: 519 LSVISLLNEPNTFSPANVDASVMYRR 442
LS+ SLL EPN SP N A+ ++ +
Sbjct: 132 LSLQSLLGEPNNASPLNAQAAELWSK 157
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 66.1 bits (154), Expect = 6e-12
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVL 520
P P PP RF ++HPNVY +G +C+SIL+ E W P +++ +L
Sbjct: 65 PEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEE-----------EGWKPAITIKQIL 113
Query: 519 LSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDK-EYENIIRKQAQ 382
L + LL++PN SPA +A M++ KDK EYE +R QA+
Sbjct: 114 LGIQDLLDDPNIASPAQTEAYTMFK-------KDKVEYEKRVRAQAR 153
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 60.5 bits (140), Expect = 3e-10
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVL 520
P P+ PP + F T+++HPN+ NG +C+ IL ++W+P ++ VL
Sbjct: 57 PTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVL 103
Query: 519 LSVISLLNEPNTFSPANVDASVMYR 445
LS+ SLL +PN P + + +Y+
Sbjct: 104 LSICSLLTDPNPDDPLVPEIAHVYK 128
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 58.4 bits (135), Expect = 1e-09
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = -3
Query: 687 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 508
P PP++RFLTK++HPNV + G +C+S L + W+P +RTVLLS+
Sbjct: 62 PMMPPNVRFLTKIYHPNVDKLGRICLSTLK-------------KDWSPALQIRTVLLSIQ 108
Query: 507 SLLNEPNTFSPANVDASVMYR 445
+L+ PN P + D + +++
Sbjct: 109 ALMGAPNPDDPLDNDVAKIWK 129
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 57.6 bits (133), Expect = 2e-09
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = -3
Query: 732 RWILXRHT*NXPLTTPYSPPSIRFLTKVWHPNV-YENGDLCISILHPPVDDPQSGELPCE 556
+W+L H P SPPS+ F TK+ HPN+ + NG++C+ IL
Sbjct: 53 QWVLDIHVHEG---YPISPPSVYFQTKIVHPNISWTNGEVCMDILKT------------- 96
Query: 555 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 445
W+P S+++ L++ISLL+ + SP NVDA+ + R
Sbjct: 97 HWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLR 133
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/93 (33%), Positives = 47/93 (50%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVL 520
PL P+ PP+I F T+++HPN G++C++IL V + P+ +R+VL
Sbjct: 63 PLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQV------------FKPSIKLRSVL 110
Query: 519 LSVISLLNEPNTFSPANVDASVMYRRWRDSKGK 421
++ LL EPN P + YR R S K
Sbjct: 111 EQILQLLREPNPDDPLVASIAEQYRNDRPSFDK 143
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 48.8 bits (111), Expect = 9e-07
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNV-YENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTV 523
P+ P+ PP + F TK++HPNV + G +C+ IL ++W+P ++++
Sbjct: 60 PIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILK-------------DQWSPVYTMKSA 106
Query: 522 LLSVISLLNEPNTFSPANVDASVMY 448
L+S+ SLL P +P + + +Y
Sbjct: 107 LISLQSLLCTPEPSNPQDAQVAQVY 131
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = -3
Query: 687 PYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQSVRTVLLSVI 508
P+ PP ++ L K++HPN+ G++C++IL + WNP ++ ++L+ +
Sbjct: 81 PHDPPKVKCLNKIYHPNIDIEGNVCLNILR-------------QDWNPVLNLNSILVGLQ 127
Query: 507 SLLNEPNTFSPANVDAS 457
L PN P N +A+
Sbjct: 128 FLFLSPNAEDPLNKEAA 144
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 36.7 bits (81), Expect = 0.004
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNVYE-NGDLCISILHPPVDDPQSGELPCERWNPTQSVRTV 523
P P+ PSI F+ +++HPN+ E +G +C+ +++ + W+P + +
Sbjct: 56 PSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVIN-------------QTWSPMFDMINI 102
Query: 522 L-LSVISLLNEPNTFSPANVDASVMYRR 442
+ + LL PN P N +A+ + R
Sbjct: 103 FEVFLPQLLRYPNASDPLNGEAAALLLR 130
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = -3
Query: 699 PLTTPYSPPSIRFLTKVWHPNVYENGDLCISI--LHPPVDDPQSGELPCERWNPTQSVRT 526
P P+ PP+IR +T N LC+S HP + WNP+ V T
Sbjct: 61 PPDYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHP------------KSWNPSWMVST 106
Query: 525 VLLSVISLL 499
+L+ ++S +
Sbjct: 107 ILVGLVSFM 115
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 431 ESRQRRYITLASTFAGLKVFGSLRSEITER 520
E + R+Y +TF+ LK FG L S+ R
Sbjct: 67 EMKARKYTETVATFSSLKPFGILDSQTINR 96
>SPCC1235.02 |bio2|SPCC320.01c|biotin synthase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = -3
Query: 528 TVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAE 361
T L+ + +L + M WRD G+++ ++NI+ +V M+ E
Sbjct: 89 TKLMKIDEVLEKAKIAKAKGSTRFCMGSAWRDLNGRNRTFKNILEIIKEVRSMDME 144
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 4.3
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = -3
Query: 519 LSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAEKEGIVVP 340
L VI P F ANV VM +WR S GK I+ + + +A EG V
Sbjct: 227 LWVIGYSQSPRVFRAANVKPEVMNFKWR-SNGKASMTTAIM--EEWLRWFDACMEGRKVI 283
Query: 339 LTLEDY 322
L ++ Y
Sbjct: 284 LLIDSY 289
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 675 PSIRFLTKVWHPNVYENGDLCISI 604
PS+ LTKV HP + G++ + I
Sbjct: 395 PSVSLLTKVLHPKYHLIGNVAVQI 418
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 513 VISLLNEPNTFSPANVDASVMY---RRWRDSKGKDKEYENIIRKQAQVARMEAEKE 355
+++ ++ N P++ D + Y R WR S K YE II + R + + E
Sbjct: 281 LVNTEDDENGIKPSDEDFLLKYMMNRGWRTSNTKQPSYEEIIDEVDAENRFDEDAE 336
>SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 9.9
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -3
Query: 474 ANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAEKEGIVVPLTLEDYCIK 313
A+ A+ Y + D G EY IRK QVAR A + ++ +++DY +K
Sbjct: 150 ADALANKAYLKAADLAGLCGEYSLAIRKFEQVAR--ASVQNNLLKWSVKDYLLK 201
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,465,191
Number of Sequences: 5004
Number of extensions: 43657
Number of successful extensions: 145
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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