Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C22
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.53 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.0  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.6  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 190 ASENSPSSIPSPTYQCTKARLXYXRSXFG 276
           AS  SP++ PSP  QC        RS  G
Sbjct: 736 ASPRSPNASPSPAEQCASTTTITARSPQG 764


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 109 RLPHPRLQRSP 141
           R PHPRL+R P
Sbjct: 110 RPPHPRLRREP 120



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 109 RLPHPRLQRSP 141
           R PHPRL+R P
Sbjct: 136 RPPHPRLRREP 146


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 154 RNPSRGQPGPHGASENSPSS 213
           + PS G PGP  +   SP +
Sbjct: 14  QQPSSGAPGPQPSPHQSPQA 33


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +2

Query: 383 PLNRXTPXXNWIKPW 427
           PL    P   WI PW
Sbjct: 532 PLTDTVPIHTWIHPW 546


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 206 PPPYPHRRTSARKHAWXT 259
           P P+P R T A+ H + T
Sbjct: 417 PKPFPRRATLAQLHNFTT 434


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 94  WLSTLRLPHPRLQR 135
           ++S  R PHPRL+R
Sbjct: 104 YISQPRPPHPRLRR 117



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 94  WLSTLRLPHPRLQR 135
           ++S  R PHPRL+R
Sbjct: 160 YISQPRPPHPRLRR 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,862
Number of Sequences: 438
Number of extensions: 4055
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)