Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C21
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193... 107 8e-24
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 88 9e-18
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 81 8e-16
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429... 80 2e-15
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781... 72 6e-13
06_03_0008 - 15333772-15333785,15335052-15335517 29 5.7
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 29 5.7
02_05_0290 - 27571504-27572119,27572211-27572279,27573205-275733... 28 7.5
>06_01_0262 -
1930552-1930632,1931096-1931152,1931236-1931287,
1931373-1931461,1931551-1931601,1931696-1931890,
1932015-1932095,1932205-1932267,1933045-1933119,
1933194-1933352,1933353-1933463,1933536-1933616,
1933721-1933807,1933920-1933967,1934357-1934421,
1935002-1935065,1935220-1935288
Length = 475
Score = 107 bits (258), Expect = 8e-24
Identities = 52/60 (86%), Positives = 54/60 (90%)
Frame = -3
Query: 431 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRPV 252
SGETEDTFIADL VGLSTGQIKTGAPCRSERLAKYNQ+LRIEEELG A YAG+ FR PV
Sbjct: 413 SGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGEKFRAPV 472
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -2
Query: 585 VTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKRNGWGTMVSHR 433
VTNP R+A A+ +K CN LLLKVNQIGSVTESI+A ++KR GWG M SHR
Sbjct: 362 VTNPTRVAKAISEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHR 412
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Frame = -1
Query: 703 FIKDFPMVSIEDPFDQDDWSAWANLTGR--TPIQIVGDDLXGDKP 575
F+ ++P+VSIEDPFDQDDW+ +A LT +QIVGDDL P
Sbjct: 321 FVSEYPIVSIEDPFDQDDWATYAKLTDEIGQQVQIVGDDLLVTNP 365
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 431 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFR 261
SG+T+D+FIADL VG + GQIK GAPCR E L+KYNQ+LRIEEELG + YAG+N+R
Sbjct: 423 SGDTDDSFIADLAVGAAAGQIKAGAPCRGECLSKYNQLLRIEEELGSDGVYAGENWR 479
Score = 62.1 bits (144), Expect = 5e-10
Identities = 37/123 (30%), Positives = 59/123 (47%)
Frame = -2
Query: 801 VFQGWKYDLDFKESRSXXRRLPVIR*XADVYXTSSKIFPWCPLRILLTRMIGLHGLTSLV 622
V G KYD++FK + + ++Y +P + + H
Sbjct: 300 VCYGNKYDMEFKFAEKSGQGFKTADDLIEIYSQLCSEYPLVSIEQPFDKDDWEHSKKFTT 359
Query: 621 ARLFRLLVMI*XVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKRNGWGTMV 442
L +++ +++P+RI AV + CN L+LK NQ+G+VTE+I+ AK WG MV
Sbjct: 360 LELCQVVGDDLLMSDPERIKRAVNEYTCNALVLKANQVGTVTEAIEVVRQAKDAHWGVMV 419
Query: 441 SHR 433
SHR
Sbjct: 420 SHR 422
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 81.4 bits (192), Expect = 8e-16
Identities = 39/51 (76%), Positives = 42/51 (82%)
Frame = -2
Query: 585 VTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKRNGWGTMVSHR 433
VTNPKRIA A+ KKACN LLLKVNQIG+VTESI A L +K GWG MVSHR
Sbjct: 371 VTNPKRIAEAIGKKACNALLLKVNQIGTVTESIQAALDSKAAGWGVMVSHR 421
Score = 75.4 bits (177), Expect = 5e-14
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -3
Query: 431 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQIL 315
SGETED FIADL VGL++GQIKTGAPCRSERLAKYNQI+
Sbjct: 422 SGETEDNFIADLAVGLASGQIKTGAPCRSERLAKYNQIV 460
Score = 71.7 bits (168), Expect = 6e-13
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1
Query: 706 DFIKDFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLXGDKP 575
+F+KDFP+VSIEDPFDQDDWS+WA+L IQIVGDDL P
Sbjct: 331 EFVKDFPIVSIEDPFDQDDWSSWASLQSSVNIQIVGDDLLVTNP 374
>10_02_0022 -
4290708-4290788,4291254-4291305,4291396-4291484,
4291565-4291615,4291699-4291893,4292010-4292090,
4292190-4292252,4292480-4292554,4292630-4292710,
4292784-4292888,4292977-4293057,4293156-4293242,
4293322-4293369,4293923-4293987,4294109-4294172,
4294828-4294896
Length = 428
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = -2
Query: 585 VTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKRNGWGTMVSHR 433
VTNP R+A A+++K+CN LLLKVNQIGSVTESI+A ++KR GWG M SHR
Sbjct: 334 VTNPTRVAKAIQEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHR 384
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 703 FIKDFPMVSIEDPFDQDDWSAWANLTGR--TPIQIVGDDLXGDKP 575
F+ ++P+VSIEDPFDQDDW +A +T +QIVGDDL P
Sbjct: 293 FVSEYPIVSIEDPFDQDDWEHYAKMTAEIGEQVQIVGDDLLVTNP 337
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/60 (53%), Positives = 34/60 (56%)
Frame = -3
Query: 431 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRPV 252
SGETEDTFIADL VGL+T +LRIEEELG A YAG FR PV
Sbjct: 385 SGETEDTFIADLAVGLAT-------------------LLRIEEELGAAAVYAGAKFRAPV 425
>03_02_0365 -
7816966-7817046,7817441-7817492,7817590-7817678,
7817762-7817854,7817900-7818094,7818172-7818249,
7818353-7818415,7818806-7818880,7818958-7819038,
7819329-7819409,7819516-7819602,7819682-7819729,
7820317-7820381,7820566-7820629,7821254-7821322
Length = 406
Score = 71.7 bits (168), Expect = 6e-13
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -2
Query: 573 KRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKRNGWGTMVSHR 433
+R+A A++ KACN LLLKVNQIGSVTESI+A ++KR GWG M SHR
Sbjct: 316 QRVAKAIKDKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHR 362
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 703 FIKDFPMVSIEDPFDQDDWSAWANLTGR--TPIQIVGDDLXGDKP 575
F+ ++P+VSIEDPFDQDDW +A +T +QIVGDDL P
Sbjct: 257 FVSEYPIVSIEDPFDQDDWVHYAKMTEEIGDQVQIVGDDLLVTNP 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 33/60 (55%), Positives = 34/60 (56%)
Frame = -3
Query: 431 SGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRPV 252
SGETEDTFIADL VGLST +LRIEEELG A YAG FR PV
Sbjct: 363 SGETEDTFIADLAVGLST-------------------LLRIEEELGAAAVYAGAKFRAPV 403
>06_03_0008 - 15333772-15333785,15335052-15335517
Length = 159
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 358 APVLI*PVDKPTTRSAIKVSSVSPESVRDHCAPSVPLGQQVSIN*LCYA 504
AP P DKP +S+ +++R+ APS + Q S+ L +A
Sbjct: 27 APQKTLPTDKPAVPMPPTFNSMPSKTLREFAAPSANISNQPSLKYLVFA 75
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -1
Query: 313 ALKRNLASTPNTPGRTSVDRSKNSLKKT*NSVFLSYPHFDSNKKSSIDY 167
ALKR + T G S+DRS +SLK + V S P+ +S SS Y
Sbjct: 515 ALKRPMGKTD---GNISLDRSNSSLKGSLYRVNESNPNMESTGASSHQY 560
>02_05_0290 -
27571504-27572119,27572211-27572279,27573205-27573332,
27573854-27573976
Length = 311
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 473 WPRGTDGAQW--SLTDSGETEDTFIADLVVGL 384
W RG +G QW SLT G+ + D +GL
Sbjct: 8 WDRGKEGVQWRSSLTSGGDVSEELWGDGWLGL 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,275,085
Number of Sequences: 37544
Number of extensions: 389890
Number of successful extensions: 952
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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