Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C21
         (802 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0)                   79   3e-15
SB_26684| Best HMM Match : DUF1279 (HMM E-Value=0.52)                  29   3.3  
SB_22758| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_53284| Best HMM Match : DUF1279 (HMM E-Value=1.5)                   29   5.8  
SB_14512| Best HMM Match : IncA (HMM E-Value=0.12)                     29   5.8  
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)                 28   7.7  

>SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0)
          Length = 284

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 37/45 (82%), Positives = 39/45 (86%)
 Frame = -2

Query: 567 IATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKRNGWGTMVSHR 433
           I TA+EKKACNCLLLKVNQIGSVTESI A  LA+ NGWG MVSHR
Sbjct: 158 IQTAIEKKACNCLLLKVNQIGSVTESIKACKLAQSNGWGVMVSHR 202



 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = -1

Query: 685 MVSIEDPFDQDDWSAWANLTGRTPIQIVG 599
           +VSIED FDQD W AW+ LTG   IQIVG
Sbjct: 129 VVSIEDAFDQDHWDAWSKLTGNVDIQIVG 157



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -3

Query: 431 SGETEDTFIADLVVGLSTGQ 372
           SGETEDTFIADLVVGL  GQ
Sbjct: 203 SGETEDTFIADLVVGLCAGQ 222


>SB_26684| Best HMM Match : DUF1279 (HMM E-Value=0.52)
          Length = 464

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 460 VPLGQQVSIN*LCYAADLIDLQ*QTVACLL--LNCSSDTLRVCHRLDHHQ 603
           +P G  +S + LC   D +  +   V C L  +  + D LRV H++  HQ
Sbjct: 282 MPTGHVMSTDWLCIGVDRVCAERHGVRCFLQLIVVAHDALRVYHQIARHQ 331


>SB_22758| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 364

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +3

Query: 366 LDLTRGQTNYQVGNKGIFGLTRICERPLCPIRSSWPASEHQLT 494
           +  T   TN  +G+KG    T  C  P  P   SW +S+   T
Sbjct: 258 IPFTSASTNVPLGSKGTTLATSSCNFPQQPFSKSWGSSQVSAT 300


>SB_53284| Best HMM Match : DUF1279 (HMM E-Value=1.5)
          Length = 427

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 454 PSVPLGQQVSIN*LCYAADLIDLQ*QTVACLL--LNCSSDTLRVCHRLDHHQ 603
           P +P G  VS + LC   D +  +   V   L  +  + D LRV H++  HQ
Sbjct: 358 PRMPTGHVVSTDWLCLGVDRVCAERHGVCGFLQLIVVAHDALRVYHQIARHQ 409


>SB_14512| Best HMM Match : IncA (HMM E-Value=0.12)
          Length = 642

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 454 PSVPLGQQVSIN*LCYAADLIDLQ*QTVACLL--LNCSSDTLRVCHRLDHHQ 603
           P +P G  VS + LC   D +  +   V   L  +  + D LRV H++  HQ
Sbjct: 358 PRMPTGHVVSTDWLCLGVDRVCAERHGVCGFLQLIVVAHDALRVYHQIARHQ 409


>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
          Length = 521

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 328 TTKFCALKRNLASTPNTPGRTSVDRSKNSLKKT 230
           T++  +LKR+L ++P T  RTS+  S+ +  KT
Sbjct: 111 TSRKTSLKRSLKTSPKTSRRTSLKTSQKTSPKT 143


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,444,951
Number of Sequences: 59808
Number of extensions: 445590
Number of successful extensions: 1247
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)