Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C20
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 113 2e-25
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 43 3e-04
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 43 3e-04
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 42 4e-04
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 42 4e-04
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 42 8e-04
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 42 8e-04
03_01_0034 + 318432-318825,318902-319851 42 8e-04
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 41 0.001
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 40 0.003
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 40 0.003
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 39 0.004
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 39 0.005
03_06_0165 - 32108697-32109788 31 0.82
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 29 5.8
07_03_1237 + 25073010-25073513 29 5.8
07_02_0030 + 12002825-12003510,12003654-12003708,12003911-120039... 28 7.7
04_04_0227 - 23762738-23763268 28 7.7
03_05_0612 + 26117306-26118045,26118151-26118680,26119247-261192... 28 7.7
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 113 bits (272), Expect = 2e-25
Identities = 58/99 (58%), Positives = 74/99 (74%)
Frame = -3
Query: 663 ANQXXYISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAH 484
A+Q YISILNIIQGEV+P+QVH+SLQRIRER+L FI WGPAS+Q
Sbjct: 314 ASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQ-------------- 359
Query: 483 KVSGLLLANHTNISSLFDRCLQQFDKLRKREAFLEVFRQ 367
VSGL+LANHT+I LF +CL Q++KLRK++AFL+ +R+
Sbjct: 360 -VSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRK 397
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 368 KEPMFRES-LDELDASRGVVDELVHEYRAAATPDYVHWNPESS 243
K PMF ++ L E D SR +++ LV EY+A +PDY+ W E +
Sbjct: 397 KFPMFEDNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDA 439
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/94 (21%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G+V P V+ ++ I+ +R F+ W P + ++ + P V ++ +
Sbjct: 312 YMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKV 371
Query: 468 -----LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+++N+T ++ +F R +FD + + AF+
Sbjct: 372 QRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFV 405
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/94 (21%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G+V P V+ ++ I+ RR F+ W P + ++ + P ++ +
Sbjct: 393 YMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKV 452
Query: 468 -----LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+++N+T ++ +F R ++FD + + AF+
Sbjct: 453 RRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFV 486
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/94 (21%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G+V P V+ ++ I+ +R F+ W P + ++ + P V + ++ +
Sbjct: 312 YMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKV 371
Query: 468 -----LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+++N T++ +F R +FD + + AF+
Sbjct: 372 QRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFV 405
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/89 (22%), Positives = 48/89 (53%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G++ +V + + ++ + + F+ W P +V+ ++ P+ K++
Sbjct: 310 YLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPN---GLKMAST 366
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/89 (22%), Positives = 47/89 (52%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G++ +V + + ++ + + F+ W P +V+ ++ P K++
Sbjct: 310 YLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP---IGLKMAST 366
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/89 (22%), Positives = 47/89 (52%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G++ +V + + ++ + + F+ W P +V+ ++ P K++
Sbjct: 310 YLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPR---GLKMAAT 366
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 367 FVGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/89 (22%), Positives = 46/89 (51%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G++ +V + + ++ + + F+ W P +V+ + P K++
Sbjct: 310 YLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMAST 366
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/94 (21%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G+V P V+ ++ I+ +R F+ W P + ++ + P V ++ +
Sbjct: 312 YMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKV 371
Query: 468 -----LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+++N T++ +F R +FD + + AF+
Sbjct: 372 QRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFV 405
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/89 (21%), Positives = 47/89 (52%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G++ +V + + ++ + + F+ W P +V+ ++ P + ++
Sbjct: 331 YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MAST 387
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 388 FIGNSTSIQEMFRRVSEQFTAMFRRKAFL 416
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/89 (21%), Positives = 47/89 (52%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G++ +V + + ++ + + F+ W P +V+ ++ P + ++
Sbjct: 310 YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MAST 366
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 367 FIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/89 (21%), Positives = 47/89 (52%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G++ +V + + ++ + + F+ W P +V+ ++ P + ++
Sbjct: 490 YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MAST 546
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 547 FVGNSTSIQEMFRRVSEQFTAMFRRKAFL 575
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/89 (21%), Positives = 45/89 (50%)
Frame = -3
Query: 648 YISILNIIQGEVEPSQVHKSLQRIRERRLAAFIPWGPASVQVALSRRSPHVTAAHKVSGL 469
Y++ + +G + +V + + ++ + + F+ W P +V+ ++ P ++
Sbjct: 326 YLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---VGLSMAST 382
Query: 468 LLANHTNISSLFDRCLQQFDKLRKREAFL 382
+ N T+I +F R +QF + +R+AFL
Sbjct: 383 FVGNSTSIQEMFRRVSEQFTAMFRRKAFL 411
>03_06_0165 - 32108697-32109788
Length = 363
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 455 WLASSRPDTLCAAVTWGER-RESATCTD-AGPHGMKAARRRSRMRCSDL 595
W AS+ +LCA +GER + CTD AG + RS MR DL
Sbjct: 75 WSASNPYSSLCALALFGERSKNKILCTDMAGHTSIYNPELRSFMRMPDL 123
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = -1
Query: 497 SRPRTRCRACCSPTTPTSPRCSIDVCNNSTSCASAKRSWRCSAKEPMFRESLDELDASRG 318
S+P+ R RA + P+ N T C++A + C A P+ E L+E+ G
Sbjct: 48 SKPKRRRRATSAGEGPSVDEPYETKGPNLTRCSAAIAAKACRALSPVHHEKLEEI----G 103
Query: 317 VVDELVHEYRAAATPDYVHW 258
+ + PD + W
Sbjct: 104 LDAVACMSLESLEQPDLIRW 123
>07_03_1237 + 25073010-25073513
Length = 167
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +3
Query: 279 GGGAVL----VHQLVHHAARRVQLVQRLAEHXXXXXXXXXXXRACAACRIVADIDRTARR 446
GGGA VH+ +RV+L +R +H R C ACR +D R R
Sbjct: 48 GGGAACGGFDVHEACLTLPKRVKLGRRHRDHELTLSVLTASRR-CVACRETSDAGRCMYR 106
Query: 447 C 449
C
Sbjct: 107 C 107
>07_02_0030 +
12002825-12003510,12003654-12003708,12003911-12003996,
12004093-12004433,12004512-12004699,12004776-12004962,
12005035-12005139,12005202-12005239,12005369-12005653
Length = 656
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 400 AQLVELLQTSIEQRGDVGVVGEQQARHLVRGRDVGRAPRERHLHGRRPPRDEGGQAP 570
A+ VEL++ I+ + + G+ GEQ RH ++ R P + PP + G+ P
Sbjct: 199 AEGVELMERMIKLK-EQGLQGEQITRHFIKSRYSHLLPVVPYNAFNPPPPETAGKQP 254
>04_04_0227 - 23762738-23763268
Length = 176
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 497 SRPRTRCRACCSPTTPTSPR 438
+ PR RCRA S T+PT PR
Sbjct: 2 AEPRARCRAPQSSTSPTWPR 21
>03_05_0612 +
26117306-26118045,26118151-26118680,26119247-26119278,
26119910-26121175
Length = 855
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 395 AKRSWRCSAKEPMFRESLDELDASRGVVDELV--HEYRAAATPDYVHWNPESSQ 240
A R W P+ R+ +D +DA+ V D V Y TP + W ES +
Sbjct: 119 ATRWWDRLPPRPLPRDEMDRIDAAYLVFDPAVSPRHYEVFLTPSF-RWKSESEK 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,090,512
Number of Sequences: 37544
Number of extensions: 364619
Number of successful extensions: 1641
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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