Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C17
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.23 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 570  PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 463
            PLT  R  + T    PCR+   SP++     T RST
Sbjct: 915  PLTSPRQPAETHAGSPCRNSA-SPASSDRSGTPRST 949


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 146 LITFELMYLLWLSYEKLSPIFI 81
           +ITF ++ +   SYEKLSP+ +
Sbjct: 326 VITFLIVMVQKASYEKLSPVVL 347


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = +2

Query: 572 GHWYLD-GVRNWLLDMDG 622
           GHWYLD G   W   M G
Sbjct: 461 GHWYLDCGFGPWKPSMHG 478


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 410 WYRYLNWVRYG 442
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 410 WYRYLNWVRYG 442
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,669
Number of Sequences: 336
Number of extensions: 2386
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)