Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C17
(814 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 40 0.002
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.090
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 34 0.16
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 33 0.36
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 31 1.1
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 31 1.5
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 30 2.6
SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) 29 3.4
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 29 3.4
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 29 4.5
SB_56923| Best HMM Match : PT (HMM E-Value=0.95) 29 5.9
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 29 5.9
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 7.8
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = -2
Query: 630 AQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 457
AQ PS SRS+ R+ SR Q + SRS SR++ + RS+ +S S ++S SRS L
Sbjct: 36 AQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSL 93
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 463
S SRS+ R+ SR + + SRS+SR++ + RS+ S S G +QST S+
Sbjct: 54 SQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSLSGGSSQSTRNSS 105
Score = 31.5 bits (68), Expect = 0.84
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 439
S SR + + Q P + SRS SR++ + RS+ S S ++S SRS RS
Sbjct: 24 SRSRGSNGSRGKAQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSR 83
Query: 438 YRTQLRYR 415
R++ R R
Sbjct: 84 SRSRSRSR 91
>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/80 (36%), Positives = 35/80 (43%)
Frame = -2
Query: 657 PTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQS 478
PTP +Y PS + + TPSRY P TPSR T P R T ST +
Sbjct: 515 PTPSRYNTPWSTPSRYNTPWSTPSRYNTPWSTPSR--YNTPWSTPSRYN-TPWSTPSRYN 571
Query: 477 TSRSTCLCTLRSPYRTQLRY 418
T ST +P+ T RY
Sbjct: 572 TPWST-PSRYNTPWSTPSRY 590
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/79 (35%), Positives = 34/79 (43%)
Frame = -2
Query: 654 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 475
TP +Y PS + + TPSRY P TPSR T P R T ST +T
Sbjct: 506 TPSRYNTPLPTPSRYNTPWSTPSRYNTPWSTPSR--YNTPWSTPSRYN-TPWSTPSRYNT 562
Query: 474 SRSTCLCTLRSPYRTQLRY 418
ST +P+ T RY
Sbjct: 563 PWST-PSRYNTPWSTPSRY 580
Score = 33.5 bits (73), Expect = 0.21
Identities = 28/79 (35%), Positives = 34/79 (43%)
Frame = -2
Query: 654 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 475
TP +Y PS + + TPSRY P TPSR T P R T ST +T
Sbjct: 566 TPSRYNTPWSTPSRYNTPWSTPSRYNTPWSTPSR--YNTPWSTPSRYN-TPWSTPSRYNT 622
Query: 474 SRSTCLCTLRSPYRTQLRY 418
ST +P+ T RY
Sbjct: 623 PWST-PSRYNTPWSTPSRY 640
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 654 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRST 547
TP +Y PS + + TPSRY P TPSR T
Sbjct: 646 TPSRYNTPWSTPSRYNTPWPTPSRYNTPWSTPSRVT 681
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 654 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSR 553
TP +Y PS + + TPSRY P TPSR
Sbjct: 616 TPSRYNTPWSTPSRYNTPWSTPSRYNTPWSTPSR 649
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 654 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSR 553
TP +Y PS + + TPSRY P TPSR
Sbjct: 626 TPSRYNTPWSTPSRYNTPWSTPSRYNTPWSTPSR 659
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 654 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSR 553
TP +Y PS + + TPSRY P TPSR
Sbjct: 636 TPSRYNTPWSTPSRYNTPWSTPSRYNTPWPTPSR 669
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/73 (35%), Positives = 31/73 (42%)
Frame = -2
Query: 636 LTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 457
+T PS + TPSRY P TPSR T P R T ST +T ST
Sbjct: 502 VTESTPSRYNTPLPTPSRYNTPWSTPSR--YNTPWSTPSRYN-TPWSTPSRYNTPWST-P 557
Query: 456 CTLRSPYRTQLRY 418
+P+ T RY
Sbjct: 558 SRYNTPWSTPSRY 570
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 34.7 bits (76), Expect = 0.090
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -2
Query: 654 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRT--Q*KRPCRSQLTSPSTGHTQ 481
TP K L P + TP + Q TP +S+ +T + C + ++ S+ HT+
Sbjct: 90 TPCKDKLLHNTPCKEQLSHNTPCKEQLSHNTPCKSSCQTTHHARSSCHTTHSARSSCHTK 149
Query: 480 STSRSTCLCTLRSPYRTQLRY 418
++RS+C T P + QL +
Sbjct: 150 HSTRSSCHTT--QPCKKQLSH 168
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRS 442
S SRS+ ++ SR + +P+RS S + + RS S S HT+S SRS RS
Sbjct: 406 SSSRSRTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSRSRS 464
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -2
Query: 564 TPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
T SRS SR + + P RS+ S + ++S +RS RS R+++R R
Sbjct: 412 TKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSR 461
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = -2
Query: 663 QCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPST--- 493
QC +PLK TL CP SQ +P + PP + +Q + P +S L+ +T
Sbjct: 856 QCISPLKNTLKQVCP----SQLESPKQCISPPKNTLKQVCPSQLESPKQSDLSPKNTLKQ 911
Query: 492 -GHTQSTSRSTCL 457
G +Q S C+
Sbjct: 912 AGPSQLESPEPCV 924
Score = 31.9 bits (69), Expect = 0.64
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -2
Query: 663 QCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS--TG 490
QC +P K TL CP SQ +P QC ++P ++T K+ C SQL SP
Sbjct: 812 QCISPPKNTLKQVCP----SQLESPK--QC--ISPPKNTL----KQVCPSQLESPKQCIS 859
Query: 489 HTQSTSRSTCLCTLRSP 439
++T + C L SP
Sbjct: 860 PLKNTLKQVCPSQLESP 876
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 550 HIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVH 452
H P+PV V P +PV P PV + VP+H
Sbjct: 212 HHPFPVRVPVRVPFRVPVRVPVPVRVP--VPIH 242
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 520 PFPVNIPVDRPYPVHIEKHVPVHI 449
PFPV +PV P+ V + VPV +
Sbjct: 214 PFPVRVPVRVPFRVPVRVPVPVRV 237
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = -2
Query: 702 PRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRP 523
PR+++RP+ R + +P + P R + ++P R Q P S+S +R
Sbjct: 347 PRQQSRPVVRGRRYSQSP------NRAPVSQRQRSQSPQRVQASPRRRSQSPDHVSPRR- 399
Query: 522 CRSQLTSPSTGHTQSTSRS 466
+SQ + ++ T+ SRS
Sbjct: 400 -KSQTPNRASTSTRQQSRS 417
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -2
Query: 633 TAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLC 454
T S SR+ R+ SR Q ++ SRS S +Q + +S S S ++S SRS
Sbjct: 222 TPSSGSGSRNSSRSASRSQSHSVSRSRSKSLSQSRSRSQSHSASRSVSRSRSRSRSGSRS 281
Query: 453 TLRS 442
RS
Sbjct: 282 RTRS 285
>SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 456 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
TG WTG+G TG TG+GT TG+G
Sbjct: 171 TGHGTGRWTGHG--TGRWTGHGTGRWTGHG 198
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 456 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
TG WTG+G TG TG+GT G G
Sbjct: 179 TGHGTGRWTGHG--TGRWTGHGTGMGQGVG 206
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = -2
Query: 720 SQTXALPRREARPIX--R*KNQCPTPLKYTLTAQCPSMS-RSQFRTPSRYQCPPLTPSRS 550
S+ + PR P+ R + P + +T + P+ S ++ R P+ C P T S
Sbjct: 131 SKNYSTPREGEGPVVMARLRVCAPANINFTTAPEPPAKSAQTPPRIPTPTSCQPSTISPG 190
Query: 549 TSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTL 448
+ P RS LT P + RS C T+
Sbjct: 191 GTPYMYGGPYRSALTYPVLVQQKRLDRSPCHVTM 224
>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
Length = 284
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 510 LTSPSTGHTQSTSRSTCLCTLRSPYRTQLRY 418
L P+T HT T+ T CT R PYR +RY
Sbjct: 112 LRIPNTLHTTHTAYRT-QCTYRIPYRYHIRY 141
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQCPPLTP--SRSTSRTQ*KRPCRSQLTSPSTGHTQST 475
S SRS R+ SR P L+P SRS SR++ + +S SP+ +T++T
Sbjct: 427 SYSRSPVRSWSRSHSPSLSPQRSRSYSRSRSRSFSKSISGSPTPKYTRTT 476
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*K------RPCRSQLTSPSTGHT-QSTSRSTC 460
S SRS+ RTPS P T SR++SR + K + + T S G +T+++ C
Sbjct: 1375 SRSRSRTRTPSTPFTPSTTSSRASSRGKAKGGAKTTKTTKKCTTRKSRGQNGDTTTKTKC 1434
Query: 459 LCTLR 445
+ T R
Sbjct: 1435 ITTRR 1439
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQ----CPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 466
++SR Q R PS PP S SR+ + RS+ +PST T ST+ S
Sbjct: 1341 ALSRQQRRRPSPSSLGSLAPPSRTSTPRSRSTPRSRSRSRTRTPSTPFTPSTTSS 1395
>SB_56923| Best HMM Match : PT (HMM E-Value=0.95)
Length = 441
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 657 PTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRS 550
PT ++T+ C S R+P QC P +P+ S
Sbjct: 309 PTESTSSMTSPCGSQMSYPARSPPHVQCDPFSPTSS 344
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 496
S SRS+ RTP R++ +P++ SR++ + P R + S S
Sbjct: 62 SFSRSKSRTPPRHRRRSRSPNKKHSRSKSRTPPRHRRRSRS 102
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.3 bits (60), Expect = 7.8
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = -2
Query: 657 PTPLKYTLTAQCPSMS----RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS-- 496
PTP + T+ P+ S S TPS P TP+ S + T P S +PS
Sbjct: 88 PTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTSTTSYTPTTSYTPTPSYT 147
Query: 495 --TGHTQSTS-RSTCLCTLRSPYRTQLRY 418
T +T +TS ST T Y + Y
Sbjct: 148 STTSYTSTTSYTSTTSYTSTPSYTSTTSY 176
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 7.8
Identities = 26/105 (24%), Positives = 49/105 (46%)
Frame = -2
Query: 729 RAYSQTXALPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRS 550
R SQ+ + R + R +++ P K + + P RS FR R + PP SR
Sbjct: 614 RKRSQSRSSSRSRSSSYSRSRSRSPDRRKRSYSP--PPRRRSPFR--ERRRSPPRRTSRW 669
Query: 549 TSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
+S++ +R +SP+ ++S S S +SP ++++ +
Sbjct: 670 SSQSPDRRSPARIKSSPARSRSRSQSASPRHSKSKSPALSKVQVK 714
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,467,862
Number of Sequences: 59808
Number of extensions: 313951
Number of successful extensions: 1248
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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