Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C17
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.42
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 32 0.56
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 1.3
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 30 2.3
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 29 4.0
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 4.0
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 29 4.0
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 5.2
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 5.2
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 9.1
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 9.1
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.42
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = -2
Query: 618 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 439
S SRS+ R+ R + + SRS SR++ P RS+ S S ++S SRS RSP
Sbjct: 212 SRSRSRSRSRDRRRSRSRSSSRSKSRSR-SPPKRSRRESKSKSRSRSRSRSADNRKSRSP 270
Query: 438 YRT 430
R+
Sbjct: 271 SRS 273
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.56
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 553 KHIPYPVEKAVPFPVNIPVDRPYPVHI 473
+H+P PV VP P+ +PV P P +
Sbjct: 154 QHVPVPVPVQVPVPIRVPVPVPVPTPV 180
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -2
Query: 669 KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTG 490
+++ P P + ++ P + R+PS + PP P R+ SR+ K P + SPS
Sbjct: 325 QSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS--KSPPARRRRSPSAS 382
Query: 489 HTQSTSR 469
+ R
Sbjct: 383 KSPPAPR 389
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 547 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 455
+P PV + VP P+ +P+ P P+ + VPV
Sbjct: 15 VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 544 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 449
P PV VP PV +P+ P P+ + VPV +
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 547 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 449
IP PV P P +PV P P+ + +PV +
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
>AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical
protein K06A5.1 protein.
Length = 629
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = -2
Query: 681 IXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRS--QL 508
+ R K + PT + T+ C R+ + PPL SRS + +P S QL
Sbjct: 133 VGRSKKRPPTQMAENETSSCMKPREKSTRSQAEVYLPPLKRSRSKCQVSAPQPSNSSLQL 192
Query: 507 TSPSTGHTQSTSRSTCLCT 451
+ + SR+ C T
Sbjct: 193 SQCISESVPRRSRTRCRTT 211
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 591 PSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYR 433
PSR+ Q PLTPS STS +Q P + SP G + T RS +P+R
Sbjct: 577 PSRHAQHSPLTPSTSTSSSQLLAPPK----SPQPGTSSQTFRSQASRLPIAPHR 626
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -2
Query: 654 TPL-KYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KRPCRSQLTSPSTGH 487
+PL K LT + S S F+ P Y+ PPL P STS P S TS +T
Sbjct: 1343 SPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPSTSGSTSSATKE 1402
Query: 486 TQSTSR 469
Q R
Sbjct: 1403 NQEQLR 1408
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 657 PTPLKYT-LTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQ 481
PT +K T T P+ +S TP+ + P TP+ T+ + ++P+T T
Sbjct: 380 PTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTM 439
Query: 480 STSRST 463
+S +T
Sbjct: 440 KSSPTT 445
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -2
Query: 657 PTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSR-STSRTQ*KRPC--RSQLTSPSTGH 487
PTP T P+ +S TP+ + P TP+ +T ++ P + ++P+T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 486 TQSTSRST 463
T +T +ST
Sbjct: 213 TPTTMKST 220
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -2
Query: 654 TPL-KYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KRPCRSQLTSPSTGH 487
+PL K LT + S S F+ P Y+ PPL P STS P S TS +T
Sbjct: 1343 SPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPSTSGSTSSATKE 1402
Query: 486 TQSTSR 469
Q R
Sbjct: 1403 NQEQLR 1408
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -2
Query: 633 TAQCPSMSRSQFRTPSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 457
TA S SRS+ R+ S Q L +RS S + +R ++ SPS+ ++S SRST
Sbjct: 83 TASSRSRSRSRSRSRSTMNQQIRLARTRSASGGKLRRSRSARRRSPSSSASRSRSRSTSR 142
Query: 456 CTLRSPYRTQLRYR 415
+S +RYR
Sbjct: 143 TRAQS---IPIRYR 153
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -2
Query: 633 TAQCPSMSRSQFRTPSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 457
TA S SRS+ R+ S Q L +RS S + +R ++ SPS+ ++S SRST
Sbjct: 83 TASSRSRSRSRSRSRSTMNQQIRLARTRSASGGKLRRSRSARRRSPSSSASRSRSRSTSR 142
Query: 456 CTLRSPYRTQLRYR 415
+S +RYR
Sbjct: 143 TRAQS---IPIRYR 153
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 553 KHIPYPVEKAV--PFPVNIPVDRPYPVHIEKHVPVHIEK 443
KH P P K + P P+ IP P+P + K +P H K
Sbjct: 189 KHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 544 PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 458
P P+ K +PFP +P +P P + K P
Sbjct: 238 PMPIPKPMPFPKPMPKPKPKPKPMPKPKP 266
>Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical
protein W09C5.7 protein.
Length = 783
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 207 QCVRSEDVEYVRIWNPTTILLVTHAS 284
QC R E +E V IW P+T+ L + +
Sbjct: 621 QCARLETLEGVFIWRPSTVRLFNNTA 646
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 612 SRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 463
SRS+ R+ SR + + SRS SR +R R + + + G ST++ T
Sbjct: 126 SRSRSRSRSRSRSRSYSRSRSGSRRSSRRRSRRRSSLKARGRRASTAKKT 175
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 573 PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLR 445
PP+ +R+ + + +RP R Q+ SP +G + + C+C R
Sbjct: 187 PPVVVTRAPAIIENERPWRGQVCSPQSG---CSGGAACICGAR 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,387,606
Number of Sequences: 27780
Number of extensions: 221841
Number of successful extensions: 887
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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