Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C14
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0810 + 11429776-11429985,11430003-11430935                       30   1.9  
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752...    29   5.7  
10_08_0853 - 21076085-21076138,21076188-21076333,21076540-210766...    29   5.7  
07_03_1473 + 26756338-26757583,26759067-26759472,26760867-267609...    29   5.7  
04_04_1419 - 33433463-33436009                                         29   5.7  
10_07_0077 + 12645091-12646750,12647612-12648273                       28   10.0 

>03_02_0810 + 11429776-11429985,11430003-11430935
          Length = 380

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/73 (26%), Positives = 29/73 (39%)
 Frame = +3

Query: 426 SYLLSLGTDITHINSEVIFHCFSHYIHPSHKYTRRSFMGKF*ITTARLQLFLSLXGVTFS 605
           S LL    D T     ++  C +    P+       +     +TT  +++     G   S
Sbjct: 81  STLLLTSCDSTLCQGLLVASCGNTKFWPNQTCVYTYYYNDKSVTTGLIEVDKFTFGAGAS 140

Query: 606 VPALKFACGLFRN 644
           VP + F CGLF N
Sbjct: 141 VPGVAFGCGLFNN 153


>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
            7526206-7526295,7526404-7526553,7527333-7528094,
            7528177-7528496,7528581-7528707,7528792-7528959,
            7529054-7530466,7530563-7530823,7530983-7531144,
            7531976-7532121,7532601-7532667,7533483-7533587
          Length = 1707

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 23/99 (23%), Positives = 43/99 (43%)
 Frame = +3

Query: 402  VSVPKECFSYLLSLGTDITHINSEVIFHCFSHYIHPSHKYTRRSFMGKF*ITTARLQLFL 581
            V+ P +CF   L+L   +++   + ++  FSH      K  +   + KF +    +  F 
Sbjct: 1167 VAKPSKCFDIFLNLFDFLSNDARKWVWGSFSHLEKEYKKELQGGSLDKFHLINKYIPTFS 1226

Query: 582  SLXGVTFSVPALKFACGLFRNILDEVL*XTSSIXSLRFL 698
            SL  +   +  ++F  G   +IL  V    SS+ +   L
Sbjct: 1227 SLVQLKSQMDMVQFIVGPGGSILSIVEEEASSMIAYALL 1265


>10_08_0853 -
           21076085-21076138,21076188-21076333,21076540-21076645,
           21076739-21076816,21076923-21076979,21077070-21077130,
           21077360-21077412,21077613-21077699,21077820-21077899,
           21079469-21079681,21079824-21080064
          Length = 391

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +1

Query: 529 DLSWESFESQQHAYNSSFPXLALPFLSQPLSSLVACSETYLMKSSKXRPQLXX*GSWS 702
           +L+ +   S  + Y   FP   LP++  P   L +  + Y    +   P     G WS
Sbjct: 250 NLNKDCLSSTDYPYQCFFPQYILPYIRTPYFILNSAYDVYQFHHNFVHPSCDPKGQWS 307


>07_03_1473 +
           26756338-26757583,26759067-26759472,26760867-26760930,
           26760975-26761055,26763350-26763588,26763689-26763947,
           26764359-26764538,26764937-26765092,26765174-26765350
          Length = 935

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 641 SEQATSELKGWDRKGNAXQGKEE 573
           SE+A+S L  +  KG+  QGKEE
Sbjct: 339 SEKASSRLSNYGEKGSGNQGKEE 361


>04_04_1419 - 33433463-33436009
          Length = 848

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 474 LLSLCVLYLSQGKADMKSILW 412
           L SLC + LS G+ D +S+LW
Sbjct: 12  LTSLCCVALSAGEGDRRSVLW 32


>10_07_0077 + 12645091-12646750,12647612-12648273
          Length = 773

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
 Frame = +1

Query: 301 SVLFCKSSKVIL----DLLSVNMMVNECNITIARGTTMSLYPKNAFHICFPLGQI*HT*T 468
           SV+F K SK ++    ++ +V   ++  N+ ++   ++S+    A  +   +GQ      
Sbjct: 677 SVVFKKKSKHVMRFRREVTNVGPAMSVYNVKVSGPASVSVKVTPAKLVFNKVGQ------ 730

Query: 469 QKSYFIVFHITFILHTNTHADLSWESFESQQHAYNS 576
           ++ Y+++F  T +  +N   D  W S+ S QH   S
Sbjct: 731 KQRYYVIFAST-VDASNAKPDFGWISWMSSQHVVRS 765


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,799,177
Number of Sequences: 37544
Number of extensions: 333005
Number of successful extensions: 690
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)