Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C14
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.    33   0.18 
Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal t...    28   6.8  
AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal t...    28   6.8  
AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein ...    28   6.8  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical
           protein H06O01.1 protein.
          Length = 488

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 692 PQXXN*GRXLEDFIKYVSEQATSELKGWDRKGNAXQGKE 576
           P   N GR ++DF+ ++S+ +T  LKG+ R G   +  E
Sbjct: 449 PIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487


>AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.
          Length = 488

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 692 PQXXN*GRXLEDFIKYVSEQATSELKGWDRKGNAXQGKE 576
           P   N GR ++DF+ ++S+ +T  LKG+ R G   +  E
Sbjct: 449 PIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487


>Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical
           protein W09D6.6 protein.
          Length = 801

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 393 NDNVSVPKECFSYLLSLGTDITHINSEVIFHCFSHYIHP 509
           +D  S  K   S +LS+ T    I   + + CF+ Y HP
Sbjct: 60  DDASSTSKLTISKILSICTIFAVICQSIFYFCFTFYFHP 98


>Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical
           protein R06C1.2 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 398 QCLCTQRMLFISAFPWDRYN--THKLRSHISLFFTLHSSFTQIHTQIFHGKV 547
           Q L T  +  IS+F WDRY        SH ++F  +  +        +HG V
Sbjct: 167 QFLDTSSVNQISSFTWDRYELMVENKTSHYTVFHPIQMALIISDVLAYHGSV 218


>U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical
           protein C46H11.2 protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 471 EVIFHCFSHYIHPSHKYTRRSFMGKF 548
           +++F C  HY  P++ Y   +F G F
Sbjct: 131 DIVFVCNGHYFAPNNPYEESAFEGSF 156


>AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 393 NDNVSVPKECFSYLLSLGTDITHINSEVIFHCFSHYIHP 509
           +D  S  K   S +LS+ T    I   + + CF+ Y HP
Sbjct: 60  DDASSTSKLTISKILSICTIFAVICQSIFYFCFTFYFHP 98


>AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 393 NDNVSVPKECFSYLLSLGTDITHINSEVIFHCFSHYIHP 509
           +D  S  K   S +LS+ T    I   + + CF+ Y HP
Sbjct: 60  DDASSTSKLTISKILSICTIFAVICQSIFYFCFTFYFHP 98


>AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein
           protein.
          Length = 801

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 393 NDNVSVPKECFSYLLSLGTDITHINSEVIFHCFSHYIHP 509
           +D  S  K   S +LS+ T    I   + + CF+ Y HP
Sbjct: 60  DDASSTSKLTISKILSICTIFAVICQSIFYFCFTFYFHP 98


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 169 TQHMTTLAIFIKMFIISLPKGLKCYHTFVPRYTESN 276
           T  +T  AI   +FI+S+  GLKCY  F  +   SN
Sbjct: 418 TYAITGGAIIAILFILSVCAGLKCYKKFNNKKKASN 453


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,339,128
Number of Sequences: 27780
Number of extensions: 333684
Number of successful extensions: 915
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)