Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C13
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    28   0.37 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.5  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   8.0  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 674 TGPTPVHVPAPYPVEKPVPFAVPS*EASGLPRP 576
           T P PV      PV  PVP AVP      +P+P
Sbjct: 165 TVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQP 197



 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 668 PTPVHVPAPYPVEKPVPFAV 609
           P  +  P PY VEKP P  V
Sbjct: 217 PKVIEKPVPYTVEKPYPIEV 236



 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 668 PTPVHVPAPYPVEKPVPFAVPS*EASGLPRP 576
           P P  V  PYP+E   PF V   +   +P P
Sbjct: 223 PVPYTVEKPYPIEVEKPFPVEVLKKFEVPVP 253



 Score = 23.8 bits (49), Expect = 6.0
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 6/30 (20%)
 Frame = -2

Query: 466 VDRPVAVPV----KVPVDRPY--PVTVERH 395
           V++P  V V    +VPV +PY  PVTV +H
Sbjct: 236 VEKPFPVEVLKKFEVPVPKPYPVPVTVYKH 265



 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 662 PVHVPAPYPVEKPVPFAV 609
           P++   P  +EKPVP+ V
Sbjct: 211 PIYKVIPKVIEKPVPYTV 228


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 662 PVHVPAPYPVEKPVPFAVP 606
           PV +  PYP+  P+P  +P
Sbjct: 625 PVTILVPYPIIIPLPLPIP 643



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 668 PTPVHVPAPYPVEKPVP 618
           P P+ +P P P+  P+P
Sbjct: 631 PYPIIIPLPLPIPVPIP 647


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 662 PVHVPAPYPVEKPVPFAVPS 603
           P H P  +PV    P  VPS
Sbjct: 465 PTHPPVSWPVSSDAPTTVPS 484


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 706 ARRCPRQGARRQALPPCMCLLLTPSRSQCLLLSPVEKPV 590
           A  CPR G     L P      + + S C  LSP++  V
Sbjct: 242 AAGCPRSGQGNFQLSPDFRQRASSNASSCGRLSPIQSIV 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,041
Number of Sequences: 2352
Number of extensions: 11228
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)