Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C12
         (833 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical ...   117   9e-27
AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical ...    33   0.19 

>AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18a protein.
          Length = 299

 Score =  117 bits (282), Expect = 9e-27
 Identities = 58/71 (81%), Positives = 63/71 (88%)
 Frame = -1

Query: 731 QSYTEFSLASLLXYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRE 552
           QSY+E+SLA L+ Y +KE A SEQSSRMTAMD ASKNAGEMIDKLTL FNRTRQAVITRE
Sbjct: 229 QSYSEYSLAQLIYYGMKESATSEQSSRMTAMDGASKNAGEMIDKLTLAFNRTRQAVITRE 288

Query: 551 LIEIISGAAAL 519
           LIEIISGAA +
Sbjct: 289 LIEIISGAACV 299


>AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18b protein.
          Length = 313

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 731 QSYTEFSLASLLXYALKEGACSE 663
           QSY+E+SLA L+ Y +KE A SE
Sbjct: 229 QSYSEYSLAQLIYYGMKESATSE 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,907,644
Number of Sequences: 27780
Number of extensions: 251198
Number of successful extensions: 556
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)