Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C12
         (833 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.37 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.37 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 371 FIESCHRKTCLLFFIENVFKTFIIETSDH 285
           F+ SC +   +L+FI    +T++I  S +
Sbjct: 272 FVGSCRKTDQILYFIRGCLQTYLINASTY 300


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 371 FIESCHRKTCLLFFIENVFKTFIIETSDH 285
           F+ SC +   +L+FI    +T++I  S +
Sbjct: 310 FVGSCRKTDQILYFIRGCLQTYLINASTY 338


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 96  SLVSRECCRDGSCPVSAS 149
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 96  SLVSRECCRDGSCPVSAS 149
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 507 GGLVQGGRTRDDLDELPGDDS 569
           GG+ Q G+ +++ D+   D+S
Sbjct: 73  GGIQQAGKPKEETDDKDDDES 93


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 390 WVKIFFLYFL 419
           WVK+ FLY+L
Sbjct: 331 WVKVVFLYWL 340


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,484
Number of Sequences: 438
Number of extensions: 2755
Number of successful extensions: 67
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)