Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C11
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    66   4e-13
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.7  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 65.7 bits (153), Expect = 4e-13
 Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
 Frame = -1

Query: 715 YFKTFGNE--LSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMIN 542
           +  TF +E  +    + GDR   ER+  L  FK    K L+ T VAARG+DI  +  +IN
Sbjct: 424 FLATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVIN 483

Query: 541 ITLPDEKSNYVHRIGRVGRAERMGLAIS 458
             LP     YVHRIGR GR    G A S
Sbjct: 484 YDLPKSIDEYVHRIGRTGRVGNKGKATS 511


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 194 PRPCQSNGACCE 159
           P PC++NG+C +
Sbjct: 112 PNPCRNNGSCVD 123


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 727 CRNXFSAAEYYG 762
           CR  FSAA +YG
Sbjct: 253 CRPTFSAARFYG 264


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 194 PRPCQSNGACCEI 156
           P PCQ+ G C ++
Sbjct: 228 PNPCQNGGTCHDL 240


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 459 VSSPPYPKRYGIMASGVHLADGTAG 385
           V S PYP    + + GV +  GT+G
Sbjct: 208 VPSTPYPPPGSLGSMGVSVPCGTSG 232


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 405 DEHHSP*YHTFSGT 446
           D ++SP YHT +GT
Sbjct: 415 DYYNSPLYHTSAGT 428


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -2

Query: 693 SCPVCACXATENQRSAKTIWRYSRTAK 613
           SC VC C A   +   K I+   +  K
Sbjct: 773 SCTVCTCDAKYLEIKCKRIYNEKQCCK 799


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,159
Number of Sequences: 336
Number of extensions: 3911
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)