Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C09
(803 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 188 1e-46
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 162 1e-38
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 134 2e-30
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 113 6e-24
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 105 2e-21
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 101 2e-20
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 100 4e-20
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 99 1e-19
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 97 3e-19
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 86 9e-16
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 83 6e-15
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 76 9e-13
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 76 1e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 71 3e-11
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 66 7e-10
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 60 5e-08
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 58 3e-07
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 57 6e-07
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 52 1e-05
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 48 3e-04
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 34 3.6
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 34 4.8
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 34 4.8
UniRef50_UPI0000DB7272 Cluster: PREDICTED: similar to CG10260-PB... 33 8.4
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 188 bits (458), Expect = 1e-46
Identities = 92/144 (63%), Positives = 109/144 (75%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
K P I + G F PGV+ LAPGGH+GRF+IWTQSAF RLD +
Sbjct: 70 KGPLIIYNKDQGLTRSF-RNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQSAFERLDAI 128
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
FGSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRKLNPLTN K
Sbjct: 129 FGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRKLNPLTNTK 188
Query: 375 AMLKLNPYAAVXEEESYLRAAQKE 304
AMLKLNPYAAV ++++ L +++
Sbjct: 189 AMLKLNPYAAVLKKKAVLDQVKRK 212
Score = 53.6 bits (123), Expect = 6e-06
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = -1
Query: 341 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRKNI 198
LK+KA+L+ +RKN +AL AEK G+KL +PA+KA KL+E+R K+I
Sbjct: 200 LKKKAVLDQVKRKNKRALEVAEKRGIKLPDDDPAVKALKLKEKRAKSI 247
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VYK Q LRAGKGKMRN + P + QGLTR+F P V
Sbjct: 48 VYKSQRLRAGKGKMRNRRRLHR-KGPLIIYNKDQGLTRSFRNIPGV 92
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 162 bits (393), Expect = 1e-38
Identities = 78/143 (54%), Positives = 98/143 (68%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P + + G F PG+E LAPGGH+GRFVIWT+SAF RL+ L
Sbjct: 208 RGPLVVYDKDEGLRKAF-RNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDL 266
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
FG+WK PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN +
Sbjct: 267 FGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVR 326
Query: 375 AMLKLNPYAAVXEEESYLRAAQK 307
++KLNPYA V + + L A ++
Sbjct: 327 QLIKLNPYAEVLKRRAALAAEKR 349
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 134 bits (324), Expect = 2e-30
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 113 bits (271), Expect = 6e-24
Identities = 66/147 (44%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P + + +G F PGVE LAPGGH+GRF+IWT+SAF +LD +
Sbjct: 208 RGPLVVYSEDNGVTRAF-RNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKSAFEKLDSI 266
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--ATRKLNPLTN 382
FG+ + S KK + P MA TDLTRL+ SDEI+ L AP IR A K NPL N
Sbjct: 267 FGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAPLKRNPLKN 326
Query: 381 NKAMLKLNPYAAVXEEESYLRAAQKEE 301
AM KLNPYA V E ++A +EE
Sbjct: 327 KSAMDKLNPYAKVARE---MQARAQEE 350
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 105 bits (251), Expect = 2e-21
Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 493
PGVE LAPGGHLGRF++WT SAFG LD ++GS PS KK+F LP M
Sbjct: 207 PGVETSSVYSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLPSTMM 266
Query: 492 ANTDLTRLLKSDEIRKVLR-----APNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEE 331
DL++++ S +I+KVLR A +KR + +K NPL N + L+LNPYAA +E
Sbjct: 267 KQPDLSKIINSSDIQKVLRPVRGGAVSKRGV--VQKKNPLKNFQVQLRLNPYAATFSKE 323
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 101 bits (243), Expect = 2e-20
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 493
PGVE LAPGG LGRFVIWTQSAF LD LFG+++ S K + L +P +
Sbjct: 227 PGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASVLKDGYQLLRPLL 286
Query: 492 ANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA 349
N DL R++ S++++ KV A +V+ +K NPL N KAM +LNPYA
Sbjct: 287 TNPDLARIINSNQVQEKVQPAKTTKVLHDVQKKNPLKNTKAMDRLNPYA 335
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 100 bits (240), Expect = 4e-20
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 493
PGVE LAPGG LGRFVIWTQSAF LD LFG+++ S K + L +P +
Sbjct: 73 PGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSILKDGYQLLRPLL 132
Query: 492 ANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRA 316
N DL R++ S++++ KV A V+ +K NPL N+KA+ +LNPYA ++ + A
Sbjct: 133 TNPDLARIINSNQVQEKVQAAKQTTVLHEVQKKNPLKNSKALDRLNPYA--KKQRAAATA 190
Query: 315 AQKEELEGS 289
A K G+
Sbjct: 191 AVKAHTTGT 199
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 99.1 bits (236), Expect = 1e-19
Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 493
PGVE LAPGGHLGRF+IW+ SAF LD ++G+ PS KK+F LP +
Sbjct: 230 PGVETCDVYSLNLLQLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKDFLLPSNVV 289
Query: 492 ANTDLTRLLKSDEIRKVLRAPNKRVI--RA-TRKLNPLTNNKAMLKLNPYAAVXEEE 331
+ D+ RL+ S E++ V+RA + RA +K NPL N + +L+LNPYAA +E
Sbjct: 290 SQADIGRLINSSELQSVIRAAKGSALTKRAGVQKKNPLLNKQVLLRLNPYAAGYSKE 346
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 97.5 bits (232), Expect = 3e-19
Identities = 46/94 (48%), Positives = 61/94 (64%)
Frame = -3
Query: 579 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 400
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 399 LNPLTNNKAMLKLNPYAAVXEEESYLRAAQKEEL 298
NPL N MLKLNPYA + LR A+ +L
Sbjct: 155 KNPLKNLGIMLKLNPYAKTMRRNTILRQAKNHKL 188
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 86.2 bits (204), Expect = 9e-16
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 493
PGV+ LAPG H+GRF+IWT+SAF +L+ +FG+ K ++ K F + +M
Sbjct: 227 PGVDTCRVENLSVLNLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMAQGKSGFRIAHAQM 286
Query: 492 ANTDLTRLLKSDEIRKVLRAPNKRVI-RATRKLNPLTNNKAMLKLNPYAAV 343
A D+ R++ + E K+LRA K V+ + ++ NPL N AM+KLNPYA +
Sbjct: 287 AVPDMKRVVVAAEKAKLLRA--KIVLPKVPKRANPLKNWAAMVKLNPYAKI 335
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 83.4 bits (197), Expect = 6e-15
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -3
Query: 579 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATR 403
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLK 232
Query: 402 KLNPLTNNKAMLKLNP 355
K NPL N + MLKLNP
Sbjct: 233 KKNPLKNLRLMLKLNP 248
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 76.2 bits (179), Expect = 9e-13
Identities = 43/125 (34%), Positives = 63/125 (50%)
Frame = -3
Query: 729 PXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFG 550
P I + SG F PGV+ LAPGG +GR IW++ AF +LD ++G
Sbjct: 207 PLIIYSXDSGIKKAF-RNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSEDAFKKLDVIYG 265
Query: 549 SWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAM 370
KKN+ LP+P + N D+ R++ SD+++ L + T+ N LTN
Sbjct: 266 KTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQNKNSLTNFAVR 325
Query: 369 LKLNP 355
+LNP
Sbjct: 326 CRLNP 330
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Frame = -3
Query: 624 APGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRK 445
APGGHLGRF+IWT+ A+ +LD L+G+ + K + P P + NTDL+R++ S ++
Sbjct: 241 APGGHLGRFIIWTEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQS 300
Query: 444 VLRA---PNKRVIRATRKL---NPLTNNKAMLK 364
VL+A +K++I R L + L+ N A +K
Sbjct: 301 VLKARGKQSKKIINVRRNLLIASKLSQNNARIK 333
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/110 (32%), Positives = 62/110 (56%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 493
PGV+ LAPG H GR ++WT+SAF LD ++ + K+N+ LP+ +
Sbjct: 212 PGVDLCHVSSIRLLELAPGSHPGRLILWTKSAFASLDDVYAA-------KQNYTLPRSCI 264
Query: 492 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAV 343
TD+ R+L+SD ++K P + + RK++P ++ +A+ +L+P V
Sbjct: 265 TQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGTV 313
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = -3
Query: 624 APGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRK 445
APGG GR I+T+ A RL ++GS+ S K + LP+P M N D+TR++ S E++
Sbjct: 244 APGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQS 303
Query: 444 VLRAPN-----KRVIRATRKLNPLTNNKAMLKLNP 355
VLR + R+ K N LTN LNP
Sbjct: 304 VLRPLRGFRCMGSMGRSKTKKNNLTNLTKRACLNP 338
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -3
Query: 498 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLR 319
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + L
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 318 AAQKEELE 295
A+ +L+
Sbjct: 63 EARNHKLQ 70
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = -3
Query: 624 APGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRK 445
APGG GR +IWT+SAF +LD +FG + ++ F LP + + DL L SD ++
Sbjct: 237 APGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQA 296
Query: 444 VLRAP 430
+L P
Sbjct: 297 ILDEP 301
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 56.8 bits (131), Expect = 6e-07
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
K P + + G F PGVE LAP +GR +WT+SAF LD +
Sbjct: 202 KGPLVIYNEDKGIVKAF-RNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGI 260
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+ S KK F+LP+ M N D+ ++ SD ++ VL K V+ PL +
Sbjct: 261 YES-------KKRFSLPRSIMTNADIEAVITSDAVQSVLN-EKKEVV-------PLPKCR 305
Query: 375 AMLKLN-----PYAAVXEEESYLRAAQKEELEGSC*CREEWIEAV*AKP 244
KL+ + +E + LRAAQ+ + + + EAV A+P
Sbjct: 306 CCKKLSVGACEDWQKALKEVAELRAAQEAKRTSPEVVKAVFAEAVAAQP 354
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = -3
Query: 741 SVKDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 562
S K P I + + PGVE LAPGGHLGRFVIWT+S+F +LD
Sbjct: 66 SRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSSFEKLD 125
Query: 561 PLFGSWKTPSKQKK 520
++ S++ ++++
Sbjct: 126 SIYRSFEKKLRRRR 139
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 48.0 bits (109), Expect = 3e-04
Identities = 31/91 (34%), Positives = 43/91 (47%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 493
PGVE LAP G LGR +W++SAF LD +P +
Sbjct: 219 PGVEVACVERLNLLKLAPAGALGRLCVWSKSAFEALDDYIKM------------MPTKLL 266
Query: 492 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 400
N DL+ L++S ++ LRAP + +ATRK
Sbjct: 267 KNADLSALIESTPVQAALRAPREGTPKATRK 297
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 341 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 210
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 672 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 562
PGV+ LAPGG GR +WT++A G L+
Sbjct: 268 PGVDIVVAKDLSAEDLAPGGDAGRLTVWTKAAIGALE 304
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 33.9 bits (74), Expect = 4.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 596 SSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPNRR 495
SSG H +GL+ S +G+H R++S+C +R
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 33.9 bits (74), Expect = 4.8
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 624 APGGHLGRFVIWTQSAFGRLDPL 556
APGGHLGR IW+ AF L+ +
Sbjct: 232 APGGHLGRLCIWSSKAFQMLNTI 254
>UniRef50_UPI0000DB7272 Cluster: PREDICTED: similar to CG10260-PB
isoform 2; n=2; Endopterygota|Rep: PREDICTED: similar to
CG10260-PB isoform 2 - Apis mellifera
Length = 2093
Score = 33.1 bits (72), Expect = 8.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 563 SSLPNAD*VQMTKRPR*PPGASFRRFSLLTFRSSTPGDVAG 685
S+LPN + + KRP+ P GAS S+++ RS G++AG
Sbjct: 1086 SALPNTN--SLDKRPKGPKGASSWLLSMMSTRSRYAGEIAG 1124
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,409,133
Number of Sequences: 1657284
Number of extensions: 10470335
Number of successful extensions: 27875
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27843
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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