Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C09
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 134 4e-31
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 134 4e-31
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 134 4e-31
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 131 3e-30
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 130 6e-30
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 31 6.4
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 8.5
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 8.5
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 204 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 262
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 263 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 322
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 323 IMLKLNPYAKTMRRNTILRQARNHKL 348
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRIQR--RGPCIIYNEDNGIIKAFRNIPGI 226
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 134 bits (324), Expect = 4e-31
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 131 bits (316), Expect = 3e-30
Identities = 65/146 (44%), Positives = 87/146 (59%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IWT+SAF +LD L
Sbjct: 219 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 277
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 278 YGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 337
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + L A+ +L
Sbjct: 338 IMLKLNPYAKTMRRNTILCQARNHKL 363
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 197 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 241
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 130 bits (314), Expect = 6e-30
Identities = 64/146 (43%), Positives = 87/146 (59%)
Frame = -3
Query: 735 KDPXIXFXXXSGSDSRFPATSPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 556
+ P I + +G F PG+ LAPGGH+GRF IW +SAF +LD L
Sbjct: 205 RGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDEL 263
Query: 555 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 376
+G+W+ + K N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 YGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLR 323
Query: 375 AMLKLNPYAAVXEEESYLRAAQKEEL 298
MLKLNPYA + LR A+ +L
Sbjct: 324 IMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 803 VYKXQXLRAGKGKMRNXSXYPA*RTPS*XSXRXQGLTRAFXQHPPV 666
VY Q +RAGKGKMRN R P G+ +AF P +
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKAFRNIPGI 227
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 587 LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRSG 447
+ PH A L G G Q K ++T P++R P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 564 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 430
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 70
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 564 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 430
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 815
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,944,350
Number of Sequences: 237096
Number of extensions: 1614814
Number of successful extensions: 3483
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3483
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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