Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C07
(1180 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119067-1|AAM50927.1| 217|Drosophila melanogaster LP08165p pro... 25 3.2
J03177-1|AAA28535.1| 510|Drosophila melanogaster protein ( D.me... 31 4.1
DQ017435-1|AAY82217.1| 53|Drosophila melanogaster CG10002 prot... 31 4.1
DQ017434-1|AAY82216.1| 53|Drosophila melanogaster CG10002 prot... 31 4.1
BT023936-1|ABB36440.1| 510|Drosophila melanogaster RE06859p pro... 31 4.1
BT010029-1|AAQ22498.1| 426|Drosophila melanogaster RE03865p pro... 31 4.1
AY069287-1|AAL39432.1| 392|Drosophila melanogaster GM14337p pro... 31 4.1
AE014297-4241|AAF56798.1| 510|Drosophila melanogaster CG10002-P... 31 4.1
AE014134-1217|AAN10611.1| 392|Drosophila melanogaster CG31908-P... 31 4.1
AE014134-1216|AAN10610.1| 392|Drosophila melanogaster CG31908-P... 31 4.1
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 30 5.4
M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha rec... 30 5.4
M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha rec... 30 5.4
M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha rec... 30 5.4
AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-P... 30 5.4
AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-P... 30 5.4
AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-P... 30 5.4
AM412966-1|CAL85589.1| 265|Drosophila melanogaster Fst protein. 29 9.4
AM412964-1|CAL85587.1| 266|Drosophila melanogaster Fst protein. 29 9.4
AM412963-1|CAL85586.1| 266|Drosophila melanogaster Fst protein. 29 9.4
>AY119067-1|AAM50927.1| 217|Drosophila melanogaster LP08165p
protein.
Length = 217
Score = 25.0 bits (52), Expect(2) = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 903 GGXPPPXXPPPP 868
G PPP PPPP
Sbjct: 95 GAAPPPPPPPPP 106
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 894 PPPXXPPPPPXG 859
PPP PPPP G
Sbjct: 104 PPPAPAPPPPPG 115
>J03177-1|AAA28535.1| 510|Drosophila melanogaster protein (
D.melanogaster forkhead protein (fkh) gene, complete
cds. ).
Length = 510
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 30 GGGGGGGGGGGPPP 43
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 31 GGGGGGGGGGPPPP 44
>DQ017435-1|AAY82217.1| 53|Drosophila melanogaster CG10002
protein.
Length = 53
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 30 GGGGGGGGGGGPPP 43
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 31 GGGGGGGGGGPPPP 44
>DQ017434-1|AAY82216.1| 53|Drosophila melanogaster CG10002
protein.
Length = 53
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 30 GGGGGGGGGGGPPP 43
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 31 GGGGGGGGGGPPPP 44
>BT023936-1|ABB36440.1| 510|Drosophila melanogaster RE06859p
protein.
Length = 510
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 30 GGGGGGGGGGGPPP 43
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 31 GGGGGGGGGGPPPP 44
>BT010029-1|AAQ22498.1| 426|Drosophila melanogaster RE03865p
protein.
Length = 426
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 30 GGGGGGGGGGGPPP 43
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 31 GGGGGGGGGGPPPP 44
>AY069287-1|AAL39432.1| 392|Drosophila melanogaster GM14337p
protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 58 GGGGGGNGGGNPPP 71
>AE014297-4241|AAF56798.1| 510|Drosophila melanogaster CG10002-PA
protein.
Length = 510
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 30 GGGGGGGGGGGPPP 43
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 31 GGGGGGGGGGPPPP 44
>AE014134-1217|AAN10611.1| 392|Drosophila melanogaster CG31908-PB,
isoform B protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 58 GGGGGGNGGGNPPP 71
>AE014134-1216|AAN10610.1| 392|Drosophila melanogaster CG31908-PA,
isoform A protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GGG PPP
Sbjct: 58 GGGGGGNGGGNPPP 71
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 860 PXGGGGGXXGGGXPP 904
P GGGGG GGG PP
Sbjct: 517 PPGGGGGGGGGGGPP 531
>M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 595
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 860 PXGGGGGXXGGGXPP 904
P GGGGG GGG PP
Sbjct: 506 PPGGGGGGGGGGGPP 520
>M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 601
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 860 PXGGGGGXXGGGXPP 904
P GGGGG GGG PP
Sbjct: 512 PPGGGGGGGGGGGPP 526
>M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 606
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 860 PXGGGGGXXGGGXPP 904
P GGGGG GGG PP
Sbjct: 517 PPGGGGGGGGGGGPP 531
>AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-PB,
isoform B protein.
Length = 585
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 860 PXGGGGGXXGGGXPP 904
P GGGGG GGG PP
Sbjct: 496 PPGGGGGGGGGGGPP 510
>AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-PA,
isoform A protein.
Length = 606
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 860 PXGGGGGXXGGGXPP 904
P GGGGG GGG PP
Sbjct: 517 PPGGGGGGGGGGGPP 531
>AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-PC,
isoform C protein.
Length = 606
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 860 PXGGGGGXXGGGXPP 904
P GGGGG GGG PP
Sbjct: 517 PPGGGGGGGGGGGPP 531
>AM412966-1|CAL85589.1| 265|Drosophila melanogaster Fst protein.
Length = 265
Score = 29.5 bits (63), Expect = 9.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 906 GGGXPPPXXPPPPP 865
GG PPP PPPPP
Sbjct: 92 GGQRPPPPPPPPPP 105
>AM412964-1|CAL85587.1| 266|Drosophila melanogaster Fst protein.
Length = 266
Score = 29.5 bits (63), Expect = 9.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 906 GGGXPPPXXPPPPP 865
GG PPP PPPPP
Sbjct: 92 GGQRPPPPPPPPPP 105
>AM412963-1|CAL85586.1| 266|Drosophila melanogaster Fst protein.
Length = 266
Score = 29.5 bits (63), Expect = 9.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 906 GGGXPPPXXPPPPP 865
GG PPP PPPPP
Sbjct: 92 GGQRPPPPPPPPPP 105
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,204,177
Number of Sequences: 53049
Number of extensions: 709928
Number of successful extensions: 8367
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6754
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6250403124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -