Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C07
(1180 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 1.6
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 4.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 4.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 6.4
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 6.4
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.1 bits (57), Expect(2) = 1.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 866 GGGGGXXGGGXPPP 907
GGGGG GG PPP
Sbjct: 43 GGGGGCGGGCAPPP 56
Score = 22.6 bits (46), Expect(2) = 1.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 860 PXGGGGGXXGG 892
P GGGGG GG
Sbjct: 21 PSGGGGGGGGG 31
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 911 GGGGGXPPPXXPPPXP 864
GGG G PPP PPP P
Sbjct: 23 GGGKGRPPPARPPPPP 38
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 903 GGXPPPXXPPPPPXGXF 853
GG PPP PPPPP G F
Sbjct: 766 GGCPPP--PPPPPPGGF 780
Score = 26.6 bits (56), Expect(2) = 2.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 906 GGGXPPPXXPPPPPXG 859
GG PPP PPPPP G
Sbjct: 766 GGCPPPP--PPPPPGG 779
Score = 22.2 bits (45), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 879 PPPPPXGXF 853
PPPPP G F
Sbjct: 785 PPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 903 GGXPPPXXPPPPPXGXF 853
GG PPP PPPPP G F
Sbjct: 766 GGCPPP--PPPPPPGGF 780
Score = 26.6 bits (56), Expect(2) = 2.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 906 GGGXPPPXXPPPPPXG 859
GG PPP PPPPP G
Sbjct: 766 GGCPPPP--PPPPPGG 779
Score = 22.2 bits (45), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 879 PPPPPXGXF 853
PPPPP G F
Sbjct: 785 PPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 903 GGXPPPXXPPPPPXGXF 853
GG PPP PPPPP G F
Sbjct: 349 GGCPPP--PPPPPPGGF 363
Score = 26.6 bits (56), Expect(2) = 2.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 906 GGGXPPPXXPPPPPXG 859
GG PPP PPPPP G
Sbjct: 349 GGCPPPP--PPPPPGG 362
Score = 22.2 bits (45), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 879 PPPPPXGXF 853
PPPPP G F
Sbjct: 368 PPPPPPGMF 376
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 906 GGGXPPPXXPPPPP 865
G G PPP PPPPP
Sbjct: 243 GAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 906 GGGXPPPXXPPPPP 865
G G PPP PPPPP
Sbjct: 229 GAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 906 GGGXPPPXXPPPPP 865
G G PPP PPPPP
Sbjct: 229 GAGAPPPPPPPPPP 242
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.0 bits (52), Expect(2) = 4.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 891 PPXXPPPPPXG 859
PP PPPPP G
Sbjct: 630 PPPPPPPPPMG 640
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 894 PPPXXPPPP 868
PPP PPPP
Sbjct: 609 PPPPPPPPP 617
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.0 bits (52), Expect(2) = 4.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 891 PPXXPPPPPXG 859
PP PPPPP G
Sbjct: 456 PPPPPPPPPMG 466
Score = 23.0 bits (47), Expect(2) = 4.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 894 PPPXXPPPP 868
PPP PPPP
Sbjct: 435 PPPPPPPPP 443
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 906 GGGXPPPXXPPPPPXGXFF 850
G G PPP PPPPP FF
Sbjct: 1008 GPGGPPP--PPPPPPADFF 1024
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 906 GGGXPPPXXPPPPPXGXFF 850
G G PPP PPPPP FF
Sbjct: 247 GPGGPPP--PPPPPPADFF 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,922,449
Number of Sequences: 27780
Number of extensions: 278825
Number of successful extensions: 2686
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -