Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C06
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150...    30   2.6  
11_06_0678 + 26166476-26166660,26166753-26166807,26166925-261670...    29   6.1  
03_06_0753 + 36015026-36015256,36015780-36015885,36016132-360161...    29   6.1  
03_06_0376 + 33479776-33479958,33481055-33481236,33481345-334814...    28   8.1  
01_06_1749 - 39636951-39638102                                         28   8.1  

>01_05_0564 +
           23312419-23312987,23314652-23314751,23314832-23315055,
           23315212-23316041,23316161-23316275,23316786-23316905,
           23317410-23317450,23317546-23317595,23317684-23317719,
           23317836-23317856
          Length = 701

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 463 LLHGKNGQGGGTYPRGLARGPTTFGNKNGQTGNIV 359
           LL G  G  GG+YP  +A  P  +   +GQT + V
Sbjct: 616 LLTGAAGAFGGSYPPYIALDPAFYSRSSGQTSSSV 650


>11_06_0678 +
           26166476-26166660,26166753-26166807,26166925-26167040,
           26167535-26167604,26167795-26167844,26168160-26168439,
           26170057-26170333,26170491-26170591
          Length = 377

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = -3

Query: 293 LKHLHLNAFLNLELGKGNCCMMYTKLFVCIL*IYLQIYFVI 171
           +K   +N  + +++ +  CC++ +  FVC + IYL  +  +
Sbjct: 327 IKEAVMNQPVEVQVNRNKCCILESTGFVCSVGIYLSCFLFV 367


>03_06_0753 +
           36015026-36015256,36015780-36015885,36016132-36016192,
           36016278-36016573,36016654-36016793,36016880-36016954,
           36017044-36017134,36017677-36017880,36018409-36018453,
           36018745-36018830
          Length = 444

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/71 (30%), Positives = 34/71 (47%)
 Frame = -3

Query: 560 HLQRKRATRLEI*VLRSQYSSTAAPPFQPKRITASRQKWAGRWHLPARTRKRSYHLRK*K 381
           +L+RKRA      +     S+TAA P QPK++  S Q      + P +  +RS+H     
Sbjct: 30  YLRRKRAA-----IAHLPPSATAAAPDQPKQVRPSNQ------NQPKKGHQRSHHAVDKD 78

Query: 380 WSNGKHRTDLN 348
            +   H  D+N
Sbjct: 79  AAKKHHHLDVN 89


>03_06_0376 +
           33479776-33479958,33481055-33481236,33481345-33481469,
           33481858-33482057,33482629-33482762,33483095-33483158,
           33483764-33484441,33484723-33484839
          Length = 560

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = -3

Query: 347 IKISVVWSTVRNASELCPLKHLHLNAFLNLELGKGNCCMMYTKLFVCI 204
           + ++V++  ++ A+   P+   HL  FL  E G  + C++Y   ++ I
Sbjct: 202 VLLAVLFIILKVAAHFVPIVVSHLKTFLVPEAGAADSCLIYCDCYMYI 249


>01_06_1749 - 39636951-39638102
          Length = 383

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 512 SQYSSTAAPPFQPKRITASRQKWAGRWHLPARTRK 408
           S  +S AAPPF P RIT+      GR    +  RK
Sbjct: 164 SSVASAAAPPFDPSRITSYAAHPNGRAFFVSVARK 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,302,367
Number of Sequences: 37544
Number of extensions: 443582
Number of successful extensions: 1101
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)