Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_C04
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   1.7  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   2.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   7.0  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 228 MKLFIFSLYLLDVLESSVRI 169
           +K FI ++Y+L +L SSV +
Sbjct: 41  LKYFIIAIYVLTILTSSVTL 60


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 59  KTIDFFRVQ*TTRPLKKKK 3
           KTIDF ++Q +  PL+K +
Sbjct: 53  KTIDFRKIQCSNSPLRKAR 71


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 149 VCKVCSRILTLDSRTSNKYRLKIN 220
           +C++ +++L LDS T   Y +  N
Sbjct: 1   MCQIKNKLLLLDSSTQPNYLILSN 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,897
Number of Sequences: 336
Number of extensions: 2349
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)