Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C03
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 44 1e-04
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 33 0.27
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 31 1.1
11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,557... 31 1.4
05_01_0120 - 828834-831143 31 1.4
05_01_0570 + 5061600-5062142,5062790-5062972 30 1.9
03_01_0336 - 2659349-2659486,2659607-2659758,2660257-2660365,266... 30 1.9
09_04_0430 + 17502387-17503505 30 2.5
08_02_0562 + 18722730-18723236 30 2.5
03_05_0056 - 20349217-20349484,20349563-20350032,20350049-203504... 29 5.7
01_01_1150 + 9161058-9162722,9162837-9162920,9163095-9163199,916... 29 5.7
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 29 5.7
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 28 7.6
06_01_0576 - 4073261-4073821,4073891-4074145 28 7.6
11_03_0008 + 8901817-8902146,8903058-8903120,8903226-8903321,890... 28 10.0
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 28 10.0
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 28 10.0
03_05_0007 - 19536239-19536532,19536937-19537047,19537126-195376... 28 10.0
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 28 10.0
01_07_0293 - 42567564-42567751,42567905-42567994,42569028-425691... 28 10.0
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = -3
Query: 594 GESFAVAATEGLMLYSQNAGLDSTFRPYRLEATSTPAAVRQSLRDGAWGSALTGALQLAE 415
G SFA A T+G++LYS + F P L+ TP V ++L + AL +L+L E
Sbjct: 722 GRSFAAATTDGVLLYSVDDSF--IFDPTDLDIDVTPEKVEEALEENQQQRALLLSLRLNE 779
Query: 414 QAPIQECLESV 382
+ I++C+ SV
Sbjct: 780 DSLIKKCIFSV 790
Score = 36.3 bits (80), Expect = 0.029
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = -2
Query: 775 DFVNRRNLXEFGXMALLEERE---DSGRRKRQHXDCRASRPGXMADRNVKPEVRVYCVRF 605
DF+N + + + G + L+++ + + G ++ + PG MA+R +P R CV+F
Sbjct: 660 DFLNSKKMTDAGALDLIDDEDSDVEEGIDQQTRGNLGLGLPGSMANRG-RPIARTKCVKF 718
Query: 604 SPT 596
+PT
Sbjct: 719 APT 721
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -1
Query: 353 SSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHKFPPS------ALLAIEKV 192
SS Y RL+ + LLE H+E +L W+ L + + AL + +K
Sbjct: 800 SSTPLKYLQRLIEAFSDLLESCPHLEFILLWSQELCKIHGNYIQQNSRALLPALKSFQKS 859
Query: 191 LTVKYSQLSKICDFNKYTIRCIKTVG 114
+T + L+ C N+Y ++ + + G
Sbjct: 860 ITRIHQDLADTCSSNEYMLKYLCSSG 885
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 502 LQSIRPESTVEAGVLAVQHQALRGGHREALPGSARTGRSTRG 627
++ R E+ +EA A + RG R+ LPG R G T G
Sbjct: 93 VEEARKEAEIEAAAAAAAEEEGRGAGRQPLPGKGRAGLVTHG 134
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = -2
Query: 727 LEEREDSGRRKRQHXDCRASRPGXMADRNVKPEVRVYCVRFSPTRGELRGGRHGGPDAVQ 548
LEE E + +H + RP A R KP R VR + R RG +H D V+
Sbjct: 867 LEENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRP--VRRTRAR---RGNQHAKIDDVE 921
Query: 547 PE 542
PE
Sbjct: 922 PE 923
>11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,
5575911-5576013,5576122-5576187,5576378-5576461,
5577448-5577522,5577615-5577668,5577752-5577895,
5578632-5578685,5578877-5578981,5579076-5579173,
5579660-5579729,5580444-5580566,5580647-5580727,
5580996-5581476,5581684-5581816,5582550-5582598,
5582704-5582892,5583642-5583703,5583762-5585316
Length = 1256
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -3
Query: 636 NLRSACTASGSRRPGESFAVAATEGLMLYSQNAGLDSTFRPYRLEATSTPAAVRQSLRDG 457
+LRS SG E AV L Q AGL RPY + TS A+ +++ D
Sbjct: 888 DLRSVIVKSGDDCRQEHLAVQLVAHLYDIYQEAGLPLWLRPYEVIVTSAYTALIETIPDT 947
Query: 456 A 454
A
Sbjct: 948 A 948
>05_01_0120 - 828834-831143
Length = 769
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 684 PIAGRQDPGTWPIGTSNLRSACTASGSRRPGE 589
P AG D G WP T+ S +GS +PGE
Sbjct: 89 PRAGSDDVGEWPNPTTPGASKAEGAGSAKPGE 120
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 571 HGGPDAVQPERRPRQYFQAVSTGGDVNAGRGEAV 470
+GGP V RPRQ +A ++AGRG+ V
Sbjct: 126 NGGPTRVHGSARPRQRRRATRARSRLSAGRGDGV 159
>03_01_0336 -
2659349-2659486,2659607-2659758,2660257-2660365,
2660459-2660563,2660874-2660957,2661072-2662745
Length = 753
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 652 PCXRVLTPGNRXVDVSSFQNPPSLPVAP 735
P +L PG R VDV+ PP+LP+ P
Sbjct: 345 PGGPLLWPGARGVDVNMLSVPPNLPIPP 372
>09_04_0430 + 17502387-17503505
Length = 372
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 413 CSASCRAPVRAEPQAPSRRDCLTAAGVDVASSRYGLKVLSRPAFWLYSIRPSVAATAKLS 592
C + +P P D L AA V +A+ R + + + + PS +
Sbjct: 30 CKEFVSQALGTDPHVPGANDLLAAADVLLAAQRRRIPNGHPDPYAVLGLDPS-------T 82
Query: 593 PGRREPDAVHADLR 634
P R PDA+HA R
Sbjct: 83 PASRRPDAIHAQYR 96
>08_02_0562 + 18722730-18723236
Length = 168
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 580 GGRHGGPDAVQPERRPRQYFQAVSTGG 500
GGRHG + +RRP Q+ +A S GG
Sbjct: 117 GGRHGARRCHRWQRRPAQHVEARSAGG 143
>03_05_0056 -
20349217-20349484,20349563-20350032,20350049-20350424,
20350546-20350568
Length = 378
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 504 EATSTPAAVRQSLRDGAWGSALTGALQLAEQAPIQECLE 388
+ATST A A AL GA A+QAP Q ++
Sbjct: 301 QATSTAAPAADQAHAAAADQALAGATAAADQAPAQVAMQ 339
>01_01_1150 +
9161058-9162722,9162837-9162920,9163095-9163199,
9163310-9163418,9163956-9164107,9164210-9164356
Length = 753
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 673 PGNRXVDVSSFQNPPSLPVAP 735
PG R VDV+ PP+LP+ P
Sbjct: 348 PGARGVDVNMLSVPPNLPIPP 368
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 389 SRHSCMGACSASCRAPVRAEPQAPSRRDCLTAAGVDVASSRYGLKVLSRPAFWLYS 556
S+HS A +A+ RAP+ E P + + D A++ G V S A W+ S
Sbjct: 76 SQHSA--AAAAAARAPLVLEEFIPVKNIGIDVVAADKAAAAGGNSVSSEKASWMVS 129
>08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -3
Query: 723 KRGRILEGGNVNXPIAGRQDPGTWPIGTSNLRSACTASGSRRPGE-SFAVAATEGLMLYS 547
K+G + G+ P P + S + +CTA +RRPGE + A AAT GL +
Sbjct: 757 KKGTLSPHGSRESPPPSPPHPAS---SLSAILYSCTARRARRPGELAHARAATLGLAAHP 813
Query: 546 QNAGLDSTFRPYRLEATSTPAAVRQS 469
++F + + AAV Q+
Sbjct: 814 SVLPRLASFYLALADLPAARAAVEQA 839
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 583 RGGRHGGPDAVQPERRPRQYFQAVSTGGDVNAGRGEAV 470
R R G A P RP+ +F+++S GG G G+ V
Sbjct: 213 RSARQGADAAAPP--RPKTFFRSLSVGGGGGGGGGKNV 248
>11_03_0008 +
8901817-8902146,8903058-8903120,8903226-8903321,
8903924-8903971,8904558-8904629,8905373-8905431,
8905582-8905672,8905749-8905886
Length = 298
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 627 SACTASGSRRPGESFAVAATEGLMLYSQNAGLDSTFRP 514
+A +S RRPG+S A AA + +S L + F P
Sbjct: 57 AAAVSSSRRRPGDSSAAAAESSAVQFSLEHDLGAGFVP 94
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 458 PSRRDCLTAAGVDVASSRYGLKVLSRPAFWL 550
P+ R ++A V ++S LK SRPAF++
Sbjct: 696 PASRPAMSAVNVMLSSGTVSLKAPSRPAFYI 726
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 690 NXPIAGRQDPGTWPIGT 640
N P+ G+ PGT PIGT
Sbjct: 703 NFPVGGKDPPGTAPIGT 719
>03_05_0007 -
19536239-19536532,19536937-19537047,19537126-19537690,
19537737-19537822
Length = 351
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -3
Query: 669 QDPGTWPIGTSNLRSACTASGSRRPGESFAVAATEGLMLYSQNAGLDSTFRPYRLE 502
Q PGT P G + C SRR G++ A G + S L F P E
Sbjct: 145 QAPGTQPSGGDGA-AECATGSSRRGGDAGAKTNAGGRLSSSLRRSLPCAFSPLGAE 199
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 383 CPXKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLL 267
C KDI L S + D GD + +A LL D +V Q L
Sbjct: 138 CTPKDIGLHTSIVHVDIGDEKIERVAFLLADD-NVSQAL 175
>01_07_0293 -
42567564-42567751,42567905-42567994,42569028-42569195,
42569284-42569562,42569673-42569739
Length = 263
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 504 EATSTPAAVRQSLRDGAWGS 445
EA + A RQ+LRD AWGS
Sbjct: 243 EARRSRIAARQALRDDAWGS 262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,161,246
Number of Sequences: 37544
Number of extensions: 458829
Number of successful extensions: 1698
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1697
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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