Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C02
(802 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 280 8e-76
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 280 8e-76
SB_56| Best HMM Match : Actin (HMM E-Value=0) 280 8e-76
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 280 1e-75
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 279 2e-75
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 278 3e-75
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 247 9e-66
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 5e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 83 3e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.007
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 31 1.4
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.5
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.4
SB_19357| Best HMM Match : Metallothio_5 (HMM E-Value=3.4) 29 4.4
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 7.7
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 280 bits (687), Expect = 8e-76
Identities = 129/138 (93%), Positives = 134/138 (97%)
Frame = -3
Query: 707 RSLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
+S LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 201 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 260
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 348
VLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 261 VLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 320
Query: 347 SKQEYDESGPSIVHRKCF 294
SKQEYDESGP+IVHRKCF
Sbjct: 321 SKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 280 bits (687), Expect = 8e-76
Identities = 129/138 (93%), Positives = 134/138 (97%)
Frame = -3
Query: 707 RSLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
+S LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 348
VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 347 SKQEYDESGPSIVHRKCF 294
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 280 bits (687), Expect = 8e-76
Identities = 129/138 (93%), Positives = 134/138 (97%)
Frame = -3
Query: 707 RSLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
+S LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 348
VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 347 SKQEYDESGPSIVHRKCF 294
SKQEYDESGPSIVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 280 bits (686), Expect = 1e-75
Identities = 129/138 (93%), Positives = 134/138 (97%)
Frame = -3
Query: 707 RSLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
+S LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 348
VLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 347 SKQEYDESGPSIVHRKCF 294
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 279 bits (683), Expect = 2e-75
Identities = 128/138 (92%), Positives = 134/138 (97%)
Frame = -3
Query: 707 RSLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
+S LPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 212 KSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANT 271
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 348
V+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 272 VMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 331
Query: 347 SKQEYDESGPSIVHRKCF 294
SKQEYDESGP+IVHRKCF
Sbjct: 332 SKQEYDESGPAIVHRKCF 349
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 278 bits (682), Expect = 3e-75
Identities = 128/138 (92%), Positives = 134/138 (97%)
Frame = -3
Query: 707 RSLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
+S LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 348
VLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 347 SKQEYDESGPSIVHRKCF 294
SKQEYDESGPSIVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 247 bits (604), Expect = 9e-66
Identities = 111/138 (80%), Positives = 125/138 (90%)
Frame = -3
Query: 707 RSLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 528
++ LPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIRKDLY+N
Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNC 71
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 348
VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 72 VLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWI 131
Query: 347 SKQEYDESGPSIVHRKCF 294
+K+EY E GP IVHRKCF
Sbjct: 132 AKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 96.3 bits (229), Expect = 3e-20
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 29/154 (18%)
Frame = -3
Query: 695 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 516
LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y + VLSG
Sbjct: 246 LPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSG 305
Query: 515 GTTMYPGIADRMQKEITAL---------------------APST-----MKIKI-IAPP- 420
G+TMYPG+ R+++EI L P T K KI I P
Sbjct: 306 GSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPP 365
Query: 419 ERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 321
RK+ V++GG++LA + W++++EY+E G
Sbjct: 366 RRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.4 bits (202), Expect = 5e-17
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Frame = -3
Query: 677 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 501
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 500 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 369
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 368 TFQQMWISKQEYDESGPSIVHRKCF*THR 282
F + +K +YDE GPSI F HR
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 695 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 516
LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2287 LPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -3
Query: 617 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 438
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 437 KII---APPERKYSVWIGGSILASL 372
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -3
Query: 581 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 426
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 425 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -3
Query: 578 SIMKCDVDIRKDLYANTVLSGGTTMYPG 495
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 647 PEALFQPSFLGMEACGIHET 588
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 695 LPDGQVITIGNERFRCPEALFQPSFL 618
LPDGQ+I+IG E E LF+P L
Sbjct: 873 LPDGQMISIGYECISSMEPLFRPDLL 898
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 385 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 558
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 559 TS 564
S
Sbjct: 815 AS 816
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 679 SSPSETKDSVAQRLSSNPRSWVWK 608
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_19357| Best HMM Match : Metallothio_5 (HMM E-Value=3.4)
Length = 187
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 743 RRXPPXHPAXPXRS-LRLPDGQVITIGNERFRCPEALFQPSFLGMEACGI 597
+R PP A RS +RL DG+ + + CP F S G E CG+
Sbjct: 115 KRTPPSKQARHDRSGVRLSDGKDVCDCQD-LNCPGCHFPCSACGSEKCGV 163
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 412 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 293
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -1
Query: 370 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 260
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 533 NTVLSGGTTMYPGIADRMQKEITALAP 453
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 367 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 248
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,417,023
Number of Sequences: 59808
Number of extensions: 502987
Number of successful extensions: 1466
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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