Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C01
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 105 5e-23
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 102 4e-22
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 99 2e-21
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 64 9e-11
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 40 0.002
01_04_0138 + 16554175-16554822 31 0.79
03_02_0778 - 11123820-11124242,11125196-11125201 30 1.8
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 30 2.4
09_04_0210 + 15644151-15644609 30 2.4
10_07_0104 - 12907816-12908301 29 3.2
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 29 3.2
01_06_0154 - 27049218-27049517,27049679-27050107 29 4.2
05_06_0170 - 26124178-26124670,26124699-26124703 29 5.5
10_06_0030 - 9834515-9834608,9834784-9835277 28 7.3
01_06_1487 - 37715421-37715942 28 7.3
01_06_0963 + 33441731-33442096,33442175-33442270 28 7.3
01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 7.3
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 105 bits (251), Expect = 5e-23
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = -2
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ VDCS + +P + FTI GN F L+ Y+L+V + T C+SGF A+D+P P GPL
Sbjct: 432 GESSVDCSSLASMPDIAFTIGGNKFVLKPEQYILKVGEGTATQCISGFTAMDIPPPRGPL 491
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+G Y+T FD GN ++GF
Sbjct: 492 WILGDVFMGAYHTVFDYGNLKVGF 515
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 102 bits (244), Expect = 4e-22
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -2
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ V C I +P + FTIA F L Y++++ Q G TVC+SGFMA D+P P GPL
Sbjct: 409 GESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPL 468
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+G Y+T FD G ++GF
Sbjct: 469 WILGDVFMGAYHTVFDFGKDRIGF 492
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAI 333
CA+ +AI D+GTSL+AGP+ V +N A+GA I
Sbjct: 273 CAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGI 307
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 99 bits (238), Expect = 2e-21
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = -2
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ VDC + +P ++FTI G F L+ +Y+L+V + C+SGF A+D+P P GPL
Sbjct: 422 GESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPL 481
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+G Y+T FD G ++GF
Sbjct: 482 WILGDVFMGAYHTVFDYGKMRVGF 505
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAI 333
CA SAIAD+GTSL+AGP+ + +N +GAT +
Sbjct: 281 CASGCSAIADSGTSLLAGPTAIITEINEKIGATGV 315
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 16/71 (22%)
Frame = -2
Query: 239 NDYVLRVAQFGHTVCLSGFMALDVPKPMGPLW----------------ILGDVFIGKYYT 108
+ YV+++ Q G TVC+SGFMA DVP P GPLW ILGDVF+ Y+T
Sbjct: 397 DQYVVKLEQQGQTVCISGFMAFDVPPPRGPLWYTNYTVIKKRELHVVRILGDVFMAAYHT 456
Query: 107 EFDAGNRQLGF 75
FD G ++GF
Sbjct: 457 VFDFGKNRIGF 467
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAI 333
C+ +AIAD+GTSL+ GP+ V +N A+GA I
Sbjct: 272 CSGGCAAIADSGTSLLGGPTTIVAQINHAIGAEGI 306
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAIA 330
C + IAD+GTSLIAGP + ++A +GAT +A
Sbjct: 335 CVDGCAVIADSGTSLIAGPIAAIAQIHAHIGATGVA 370
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKE--VEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIA 264
C A+ + + +KE +E N G G YV DC I HLP V F+I
Sbjct: 436 CNACEMAVTWMQSEFVQNHTKEGKLEYANQLCGNMPSPVGSYV-DCRHIGHLPNVAFSIG 494
Query: 263 GNDFTL 246
G F L
Sbjct: 495 GRAFEL 500
>01_04_0138 + 16554175-16554822
Length = 215
Score = 31.5 bits (68), Expect = 0.79
Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Frame = +3
Query: 135 PQDPQRAHGLRHVQRHEAGQ-----AHRVPELCHPEHVVVALEREVVPGDGKGDSRQVRY 299
P PQRA H QR AG A R E V E+ G G G+S + R
Sbjct: 41 PDRPQRAAARSHQQRRGAGGTGSSGAQRGKRREETEAVREREVAELTEGHGDGESSRRRE 100
Query: 300 EAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRAR 407
AA+H RG+ RR G RR+R
Sbjct: 101 AAALHRSTMR---RGSRRRKAAIGRRTGKSGTRRSR 133
>03_02_0778 - 11123820-11124242,11125196-11125201
Length = 142
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 152 GPWASARPAP*SRTGTPCARI 214
GPWA+ARP P G PC +
Sbjct: 9 GPWAAARPEPPPPKGRPCGPV 29
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +3
Query: 120 ADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQV-- 293
A E + +RAH RH H+A + H+ H H V+ + + P + V
Sbjct: 684 AQERARRRHKRAHSHRHSHHHDAHKRHKTELAGHRRHHVLHIHDDDDPVAAAAAAEHVIL 743
Query: 294 ----RYEAAVHDVLPEGDGRGAHRRVEG 365
R+EAA+ +G HRR G
Sbjct: 744 RRHGRHEAALGVQHRDGLKLNKHRRHGG 771
>09_04_0210 + 15644151-15644609
Length = 152
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 270 HRRERLHARGQRLRAPGGTIRAHGVPVRLHGAGRAEAHGPA 148
H+ ER A+ R R +RAHG P GAG A PA
Sbjct: 56 HKYERSLAK--RRREIAAALRAHGAPPAADGAGAARYSSPA 94
>10_07_0104 - 12907816-12908301
Length = 161
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 220 WHNSGTRCACPASWRWTCRSPWARCGS 140
W S + C CPA+ RW+ R AR S
Sbjct: 124 WRRSASGCRCPAARRWSGRWSAARARS 150
>03_06_0222 +
32466379-32466741,32466849-32466948,32467443-32467547,
32467627-32467789,32467995-32468115,32468625-32468705,
32468813-32468911,32468955-32468986,32468987-32469137,
32469477-32469563,32470290-32470409,32470514-32470645,
32470743-32470840,32470919-32471042,32471126-32471233,
32471822-32471957,32472751-32472861,32472963-32473026,
32473133-32473205,32473762-32473938,32474012-32474122,
32474189-32474449,32474811-32474981,32475073-32475228,
32475590-32475823,32475936-32476103,32476316-32476425,
32476513-32477041
Length = 1394
Score = 29.5 bits (63), Expect = 3.2
Identities = 27/100 (27%), Positives = 41/100 (41%)
Frame = -2
Query: 398 SLIAGPSKEVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRV 219
SLI S ++A +A G+ + + P + TF GN+FT+ D VL
Sbjct: 696 SLICQLSTSLDASSAVNSVLTTGAGEDIANTK--PAIS--TFEDDGNNFTVSKLDIVLGG 751
Query: 218 AQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFD 99
++ + K G W L D+ +G Y EFD
Sbjct: 752 SETKSVQLEVTPKVEGILKLHGIRWTLSDLLVGYQYFEFD 791
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 160 GFGTSSAMKPDRHTVCPNCATRST*SLPSSVKSFPAMVKVTRGRCGMRLQSTTYCPKAMA 339
G G ++A P R C NC T ST ++ P K CG+R + A A
Sbjct: 112 GAGAAAASAPRR---CANCDTTST----PLWRNGPRGPKSLCNACGIRYKKEERRAAAAA 164
Query: 340 VAPTA 354
VAPTA
Sbjct: 165 VAPTA 169
>05_06_0170 - 26124178-26124670,26124699-26124703
Length = 165
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 303 PHTAPAASHLYHRRERLHARGQRLRAPGGTIRAHGVPVR 187
P AP A+ H ER AR LR P T+ AHG+ R
Sbjct: 128 PPFAPRAAEQEHDEERGEAR---LREPSDTVAAHGLDGR 163
>10_06_0030 - 9834515-9834608,9834784-9835277
Length = 195
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 297 TAPAASHLYHRRERLHARGQRLRAPGGTIRAHGVPVRLHGAGRAEAHGPA 148
TA A + R R G+R GG H + R GAGR + H PA
Sbjct: 33 TAGAEDGRVYERAREGTTGKRTHQLGG----HSLSTRERGAGRKKGHWPA 78
>01_06_1487 - 37715421-37715942
Length = 173
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 249 REVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGR 422
R ++ G+G G +V H+ PE DGR HR V G G +RR R D R
Sbjct: 34 RRMLGGEG-GARGEVEIPTEEHEDEPEPDGRRGHRPVVSD---GHRGRRRRCRNSDLR 87
>01_06_0963 + 33441731-33442096,33442175-33442270
Length = 153
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 314 VDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGH 204
VDC P P + L G ++ LR +QFG+
Sbjct: 89 VDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQFGN 125
>01_06_0457 -
29524544-29525962,29526518-29526606,29526841-29526892,
29527573-29527677,29528181-29528208,29528279-29528343,
29528808-29528880,29528932-29529113
Length = 670
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 315 DVLPEGD-GRGAHRRVEGFHLLGGPGDQR 398
D+LPEG GRG R ++G++L+ D+R
Sbjct: 383 DILPEGHPGRGRSRVMKGWYLIYSSTDER 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,715,860
Number of Sequences: 37544
Number of extensions: 271308
Number of successful extensions: 1225
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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