Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C01
(786 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62290.1 68414.m07027 aspartyl protease family protein contai... 106 1e-23
At1g11910.1 68414.m01374 aspartyl protease family protein contai... 101 7e-22
At4g04460.1 68417.m00648 aspartyl protease family protein contai... 93 3e-19
At1g69100.1 68414.m07907 aspartyl protease family protein contai... 51 1e-06
At4g22050.1 68417.m03189 aspartyl protease family protein contai... 45 5e-05
At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing ... 29 3.5
At3g55270.1 68416.m06138 MAP kinase phosphatase (MKP1) identical... 29 4.6
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 29 4.6
At5g10720.1 68418.m01242 sensory transduction histidine kinase-r... 28 6.1
At3g11860.1 68416.m01454 expressed protein ; expression supporte... 28 8.1
At3g08680.2 68416.m01009 leucine-rich repeat transmembrane prote... 28 8.1
At3g08680.1 68416.m01008 leucine-rich repeat transmembrane prote... 28 8.1
>At1g62290.1 68414.m07027 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 513
Score = 106 bits (255), Expect = 1e-23
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = -2
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ VDCS + +P V+FTI G F L +YVL++ + C+SGF ALD+P P GPL
Sbjct: 426 GESAVDCSQLSKMPTVSFTIGGKVFDLAPEEYVLKIGEGPVAQCISGFTALDIPPPRGPL 485
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+GKY+T FD GN Q+GF
Sbjct: 486 WILGDVFMGKYHTVFDFGNEQVGF 509
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ 321
C SAIAD+GTSL+AGP+ V +N A+GA+ + Q
Sbjct: 285 CGSGCSAIADSGTSLLAGPTAVVAMINKAIGASGVVSQQ 323
>At1g11910.1 68414.m01374 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 506
Score = 101 bits (241), Expect = 7e-22
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = -2
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ VDC+ + +P V+ TI G F L +YVL+V + C+SGF+ALDV P GPL
Sbjct: 419 GESAVDCAQLSTMPTVSLTIGGKVFDLAPEEYVLKVGEGPVAQCISGFIALDVAPPRGPL 478
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+GKY+T FD GN Q+GF
Sbjct: 479 WILGDVFMGKYHTVFDFGNEQVGF 502
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ 321
C SAIAD+GTSL+AGP+ + +N A+GA + Q
Sbjct: 278 CESGCSAIADSGTSLLAGPTTIITMINHAIGAAGVVSQQ 316
>At4g04460.1 68417.m00648 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 508
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = -2
Query: 323 QYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPLW 144
Q VDC + +P VTF+I G F L DY+ ++ + + C SGF A+D+ P GPLW
Sbjct: 422 QSAVDCGRVSSMPIVTFSIGGRSFDLTPQDYIFKIGEGVESQCTSGFTAMDIAPPRGPLW 481
Query: 143 ILGDVFIGKYYTEFDAGNRQLGF 75
ILGD+F+G Y+T FD G ++GF
Sbjct: 482 ILGDIFMGPYHTVFDYGKGRVGF 504
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAI 333
CA+ SAIAD+GTSL+ GPS + +N A+GA I
Sbjct: 283 CAKGCSAIADSGTSLLTGPSTVITMINHAIGAQGI 317
>At1g69100.1 68414.m07907 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 343
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = -2
Query: 422 SAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLE 243
+A+ D+G++ I GP + V + +GAT + ++ C P LP + F I G L
Sbjct: 230 TAMVDSGSTDIFGPDEAVGKIYKEIGATKV-----IIRCEQFPALPDIYFEIGGKHLRLT 284
Query: 242 GNDYVLRVAQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFDAGN 90
+DYV V C + + K W+LG+ F+ K++T FD G+
Sbjct: 285 KHDYV-EVKTNPKKRCR---LRIVKSKNRRKDWVLGEAFMTKFHTVFDYGD 331
>At4g22050.1 68417.m03189 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 354
Score = 45.2 bits (102), Expect = 5e-05
Identities = 36/116 (31%), Positives = 50/116 (43%)
Frame = -2
Query: 437 CAQXXSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGN 258
C+ AI D+G+S I P + ++ +G +C+ LP VTFTI G
Sbjct: 242 CSSGCKAIVDSGSSNINVPMDSADEIHRYIGVEP--------NCNNFETLPDVTFTIGGK 293
Query: 257 DFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFDAGN 90
F L DY+ R + C S F V K W LG F+ ++T FD N
Sbjct: 294 AFVLTPLDYIRR----SRSQCTSKF----VGKTNRSHWTLGIPFMRVFHTVFDYQN 341
>At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 1056
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 70 GANPSWRFPASNSV*YLPMNTSPRIHSGPMGFGTSSAMK 186
G P+WR P++N LP T P I P GT M+
Sbjct: 499 GKEPNWRRPSANGTGILPSPTGPGILPSP-AQGTRRPMR 536
>At3g55270.1 68416.m06138 MAP kinase phosphatase (MKP1) identical to
MAP kinase phosphatase (MKP1) GI:13540262 from
[Arabidopsis thaliana]
Length = 534
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/87 (31%), Positives = 37/87 (42%)
Frame = +1
Query: 28 KCLINASGRAAHTAGANPSWRFPASNSV*YLPMNTSPRIHSGPMGFGTSSAMKPDRHTVC 207
K +SGR++ PS P +S+ LP TSP+ G T P+R
Sbjct: 273 KSFSQSSGRSSLRPSIPPSLTLPKFSSLSLLPSQTSPK---ESRGVNTFLQPSPNR-KAS 328
Query: 208 PNCATRST*SLPSSVKSFPAMVKVTRG 288
P+ A R SL S+K P + RG
Sbjct: 329 PSLAERRG-SLKGSLK-LPGLADSNRG 353
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -3
Query: 220 WHNSGTRCACPASWRWTCRSPWAR-CGSWG 134
W N C C A W T RS + R G WG
Sbjct: 446 WVNCSQPCFCQAPWGGTKRSGFGRELGEWG 475
>At5g10720.1 68418.m01242 sensory transduction histidine
kinase-related similar to Sensor protein rcsC (Capsular
synthesis regulator component C) (SP:Q56128) {Salmonella
typhi}; sensory transduction histidine kinase slr1759,
Synechocystis sp., PIR:S75142
Length = 950
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +1
Query: 298 MRLQSTTYCPKAMA--VAPTAA--LRASTSLEGPAISDVPVSAM 417
MRL++T + P+ + V TAA L+ S +LEG DVP+ +
Sbjct: 429 MRLEATKFRPREVVKHVLQTAAASLKKSLTLEGNIADDVPIEVV 472
>At3g11860.1 68416.m01454 expressed protein ; expression supported
by MPSS
Length = 252
Score = 27.9 bits (59), Expect = 8.1
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Frame = +3
Query: 75 EPELAVPRVELRVVLAD----EHVPQDPQRAHGLRHVQRHEAGQAHRVPELCH---PEHV 233
+PE + + ELR VLAD H P Q R V G E+ P+H
Sbjct: 123 KPETSESQAELRDVLADPHKTTHKPASSQSQVEFRDVMEDTHGTTPLQTEMSSLPLPQHF 182
Query: 234 VVALEREVVPGDGKGDSRQVRYEAAVHDVLP 326
V L++ K D+R+ VH V+P
Sbjct: 183 V--LQKPAGTSQSKADTRKA---TLVHTVMP 208
>At3g08680.2 68416.m01009 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: PF00069
Eukaryotic protein kinase domain, PF00560 leucine Rich
Repeat (5 copies)
Length = 640
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 SLPSSVKSFPA-MVKVTRGRCGMRLQSTTYCPKAMAVAPTAALRASTSLEGPAISDV 402
S+PSSVKSFPA + CG L T CP+ AP+ + +T EGP +++
Sbjct: 198 SVPSSVKSFPASSFQGNSLLCGAPL---TPCPE-NTTAPSPS--PTTPTEGPGTTNI 248
>At3g08680.1 68416.m01008 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: PF00069
Eukaryotic protein kinase domain, PF00560 leucine Rich
Repeat (5 copies)
Length = 640
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 SLPSSVKSFPA-MVKVTRGRCGMRLQSTTYCPKAMAVAPTAALRASTSLEGPAISDV 402
S+PSSVKSFPA + CG L T CP+ AP+ + +T EGP +++
Sbjct: 198 SVPSSVKSFPASSFQGNSLLCGAPL---TPCPE-NTTAPSPS--PTTPTEGPGTTNI 248
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,946,858
Number of Sequences: 28952
Number of extensions: 174686
Number of successful extensions: 554
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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