Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B24
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   4.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.5  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 190 PPRCFPSAMTCPSSXRGLWRVL 125
           P +C  +A  CPS    +W ++
Sbjct: 338 PHKCNGNAHNCPSRSHPVWEIV 359


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 190 PPRCFPSAMTCPSSXRGLWRVL 125
           P +C  +A  CPS    +W ++
Sbjct: 345 PHKCNGNAHNCPSRSHPVWEIV 366


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 190 PPRCFPSAMTCPSSXRGLWRVL 125
           P RC  +  +CP+    +W ++
Sbjct: 346 PHRCHGNLQSCPTRSHAVWEMV 367



 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 259 CGHPQCVSRGLF 224
           CG   C+ RGLF
Sbjct: 124 CGDGNCIERGLF 135


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 389 GNRSPSADPEVPNDP 433
           G  SP  DPE+P  P
Sbjct: 76  GTTSPEPDPEIPVAP 90


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +2

Query: 314 KNEMPV--SSRTIPQSTPHGTYGTKYRGNRSPSADP 415
           K E P   S R     TPHG+  +      SPSA P
Sbjct: 239 KKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASP 274


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 74  GDGNHSPSGGP 42
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -3

Query: 265 SHCGHPQCVSRGLFRHVPSGYGMSSPP 185
           SHC H  C + G  + +   +    PP
Sbjct: 146 SHCDHTTCKNGGTCQDLGKTFMCRCPP 172


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 260 LRSSTVRFQRSFSPRTIRLWNELPST 183
           L    VRF +     T++LW++L ST
Sbjct: 79  LEQFIVRFMKYHFFGTLKLWSQLFST 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,182
Number of Sequences: 336
Number of extensions: 4853
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)